RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 YES1P07947 543 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 GABRA1P14867 456 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 SDHAP31040 664 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 PCYT1AP49585 367 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 DAP3P51398 398 aaKnown RBP5.7□□□□□ -1.5
HERC4-210ENST00000480158 NUDT6P53370 316 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.7□□□□□ -1.5
HERC4-210ENST00000480158 ZP4Q12836 540 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 SMN1Q16637 294 aaKnown RBP5.7□□□□□ -1.5
HERC4-210ENST00000480158 ANKDD1AQ495B1 522 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 KLHL12Q53G59 568 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 TMEM201Q5SNT2 666 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 ZNF362Q5T0B9 420 aaPredicted RBP5.7□□□□□ -1.5
HERC4-210ENST00000480158 C1orf185Q5T7R7 199 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 C9orf135Q5VTT2 229 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 SLX4IPQ5VYV7 408 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 NSUN5P2Q63ZY6 315 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 ABLIM2Q6H8Q1 611 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 NUFIP2Q7Z417 695 aaKnown RBP5.7□□□□□ -1.5
HERC4-210ENST00000480158 FJX1Q86VR8 437 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 CPOQ8IVL8 374 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 ENTHD1Q8IYW4 607 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 UBE2J2Q8N2K1 259 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 SLC43A2Q8N370 569 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 ARIH2OSQ8N7S6 290 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 NAXEQ8NCW5 288 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 ST6GALNAC3Q8NDV1 305 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 OR6N1Q8NGY5 312 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 ASB10Q8WXI3 467 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 NSMAFQ92636 917 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 HDAC2Q92769 488 aaKnown RBP5.7□□□□□ -1.5
HERC4-210ENST00000480158 TTYH2Q9BSA4 534 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 NDEL1Q9GZM8 345 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 TP63Q9H3D4 680 aaPredicted RBP5.7□□□□□ -1.5
HERC4-210ENST00000480158 RNF122Q9H9V4 155 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 DNAJC27Q9NZQ0 273 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 RNF6Q9Y252 685 aa5.7□□□□□ -1.5
HERC4-210ENST00000480158 H0YAE9 185 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 H0YJX3 145 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 DCTN6O00399 190 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 TRMUO75648 421 aaKnown RBP5.69□□□□□ -1.5
HERC4-210ENST00000480158 KRT33AO76009 404 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 APOL3O95236 402 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 STSP08842 583 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 FCGR2AP12318 317 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 ACADSP16219 412 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 GNLYP22749 145 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 FMO3P31513 532 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 HSPA13P48723 471 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 CASP6P55212 293 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 CLRN1P58418 232 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 RPS7P62081 194 aaKnown RBP5.69□□□□□ -1.5
HERC4-210ENST00000480158 ITGADQ13349 1161 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 RNPS1Q15287 305 aaKnown RBP5.69□□□□□ -1.5
HERC4-210ENST00000480158 ETFDHQ16134 617 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 C4orf17Q53FE4 359 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 SOWAHCQ53LP3 525 aaPredicted RBP5.69□□□□□ -1.5
HERC4-210ENST00000480158 ARMC4Q5T2S8 1044 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 ZNF691Q5VV52 312 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 C12orf73Q69YU5 71 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 GTF2IRD2BQ6EKJ0 949 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 VWA1Q6PCB0 445 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 ADGRE4PQ86SQ3 457 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 GTF2IRD2Q86UP8 949 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 ZNF100Q8IYN0 542 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 C8orf59Q8N0T1 100 aaPredicted RBP5.69□□□□□ -1.5
HERC4-210ENST00000480158 ZNF843Q8N446 348 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 MARVELD2Q8N4S9 558 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 SLC37A3Q8NCC5 494 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 ADPRHL1Q8NDY3 354 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 PTP4A1Q93096 173 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 ZNF566Q969W8 418 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 LRR1Q96L50 414 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 ALKBH3Q96Q83 286 aaPredicted RBP5.69□□□□□ -1.5
HERC4-210ENST00000480158 OR2M2Q96R28 347 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 GPX7Q96SL4 187 aaPredicted RBP5.69□□□□□ -1.5
HERC4-210ENST00000480158 APOL4Q9BPW4 351 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 SF3B5Q9BWJ5 86 aaKnown RBP5.69□□□□□ -1.5
HERC4-210ENST00000480158 NUAK2Q9H093 628 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 HINT3Q9NQE9 182 aaKnown RBP5.69□□□□□ -1.5
HERC4-210ENST00000480158 ZNF226Q9NYT6 803 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 ZNF835Q9Y2P0 537 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 ZNF175Q9Y473 711 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 ALPK2Q86TB3 2170 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 IGKV1D-43A0A0B4J1Z2 117 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 B8ZZF3 427 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 PRR23D1E9PI22 279 aaPredicted RBP5.69□□□□□ -1.5
HERC4-210ENST00000480158 CCL21O00585 134 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 ARPC3O15145 178 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 SLC16A7O60669 478 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 UPK3AO75631 287 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 C1QL1O75973 258 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 SEC14L2O76054 403 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 IFNGP01579 166 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 HMGN1P05114 100 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 PRR23D2P0DMB1 279 aaPredicted RBP5.69□□□□□ -1.5
HERC4-210ENST00000480158 GLI4P10075 376 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 ZNF3P17036 446 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 BMP5P22003 454 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 AGTR1P30556 359 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms