RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 UBTD1Q9HAC8 227 aa16.52■□□□□ 0.24
AGRN-208ENST00000479707 SLC7A8Q9UHI5 535 aa16.52■□□□□ 0.24
AGRN-208ENST00000479707 AMDHD2Q9Y303 409 aa16.52■□□□□ 0.24
AGRN-208ENST00000479707 LYVE1Q9Y5Y7 322 aa16.52■□□□□ 0.24
AGRN-208ENST00000479707 UNC119BA6NIH7 251 aa16.51■□□□□ 0.23
AGRN-208ENST00000479707 ZNF99A8MXY4 864 aaPredicted RBP16.51■□□□□ 0.23
AGRN-208ENST00000479707 PTP4A3O75365 173 aa16.51■□□□□ 0.23
AGRN-208ENST00000479707 CD3EP07766 207 aa16.51■□□□□ 0.23
AGRN-208ENST00000479707 QDPRP09417 244 aa16.51■□□□□ 0.23
AGRN-208ENST00000479707 RAP2AP10114 183 aa16.51■□□□□ 0.23
AGRN-208ENST00000479707 ZNF26P17031 533 aaPredicted RBP16.51■□□□□ 0.23
AGRN-208ENST00000479707 ACVR1BP36896 505 aa16.51■□□□□ 0.23
AGRN-208ENST00000479707 LIMS1P48059 325 aa16.51■□□□□ 0.23
AGRN-208ENST00000479707 SH3BGRP55822 239 aaPredicted RBP16.51■□□□□ 0.23
AGRN-208ENST00000479707 UBE2NP61088 152 aaKnown RBP16.51■□□□□ 0.23
AGRN-208ENST00000479707 ERVK-25P63136 954 aa16.51■□□□□ 0.23
AGRN-208ENST00000479707 ANKDD1AQ495B1 522 aa16.51■□□□□ 0.23
AGRN-208ENST00000479707 ARMC4Q5T2S8 1044 aa16.51■□□□□ 0.23
AGRN-208ENST00000479707 LRFN4Q6PJG9 635 aa16.51■□□□□ 0.23
AGRN-208ENST00000479707 ZNF704Q6ZNC4 412 aaPredicted RBP16.51■□□□□ 0.23
AGRN-208ENST00000479707 RSRC1Q96IZ7 334 aaKnown RBP16.51■□□□□ 0.23
AGRN-208ENST00000479707 CHID1Q9BWS9 393 aa16.51■□□□□ 0.23
AGRN-208ENST00000479707 IL20RAQ9UHF4 553 aa16.51■□□□□ 0.23
AGRN-208ENST00000479707 ITGB1BP2Q9UKP3 347 aa16.51■□□□□ 0.23
AGRN-208ENST00000479707 PLEKHA6Q9Y2H5 1048 aa16.51■□□□□ 0.23
AGRN-208ENST00000479707 U3KQV3 271 aa16.51■□□□□ 0.23
AGRN-208ENST00000479707 AKAP6Q13023 2319 aa16.51■□□□□ 0.23
AGRN-208ENST00000479707 DHRS12A0PJE2 317 aa16.5■□□□□ 0.23
AGRN-208ENST00000479707 KRT36O76013 467 aa16.5■□□□□ 0.23
AGRN-208ENST00000479707 WNT11O96014 354 aa16.5■□□□□ 0.23
AGRN-208ENST00000479707 CAPZA2P47755 286 aa16.5■□□□□ 0.23
AGRN-208ENST00000479707 RPL27P61353 136 aaKnown RBP16.5■□□□□ 0.23
AGRN-208ENST00000479707 OR2T5Q6IEZ7 315 aa16.5■□□□□ 0.23
AGRN-208ENST00000479707 ZNF813Q6ZN06 617 aa16.5■□□□□ 0.23
AGRN-208ENST00000479707 CCDC121Q6ZUS5 278 aa16.5■□□□□ 0.23
AGRN-208ENST00000479707 NOXO1Q8NFA2 376 aa16.5■□□□□ 0.23
AGRN-208ENST00000479707 OR2T29Q8NH02 315 aa16.5■□□□□ 0.23
AGRN-208ENST00000479707 HDAC2Q92769 488 aaKnown RBP16.5■□□□□ 0.23
AGRN-208ENST00000479707 POP5Q969H6 163 aaKnown RBP16.5■□□□□ 0.23
AGRN-208ENST00000479707 MCHR2Q969V1 340 aa16.5■□□□□ 0.23
AGRN-208ENST00000479707 TSPAN32Q96QS1 320 aa16.5■□□□□ 0.23
AGRN-208ENST00000479707 KATNB1Q9BVA0 655 aa16.5■□□□□ 0.23
AGRN-208ENST00000479707 VNN3Q9NY84 501 aa16.5■□□□□ 0.23
AGRN-208ENST00000479707 SIGLEC7Q9Y286 467 aa16.5■□□□□ 0.23
AGRN-208ENST00000479707 HEATR1Q9H583 2144 aaKnown RBP16.49■□□□□ 0.23
AGRN-208ENST00000479707 B4GALT1P15291 398 aa16.49■□□□□ 0.23
AGRN-208ENST00000479707 HMGA2P52926 109 aa16.49■□□□□ 0.23
AGRN-208ENST00000479707 ADAM5Q6NVV9 412 aa16.49■□□□□ 0.23
AGRN-208ENST00000479707 KLHL17Q6TDP4 642 aa16.49■□□□□ 0.23
AGRN-208ENST00000479707 SSX8Q7RTT4 187 aa16.49■□□□□ 0.23
AGRN-208ENST00000479707 HDDC2Q7Z4H3 204 aa16.49■□□□□ 0.23
AGRN-208ENST00000479707 PIAS4Q8N2W9 510 aaPredicted RBP16.49■□□□□ 0.23
AGRN-208ENST00000479707 CLDN22Q8N7P3 220 aa16.49■□□□□ 0.23
AGRN-208ENST00000479707 OR9Q2Q8NGE9 314 aa16.49■□□□□ 0.23
AGRN-208ENST00000479707 OR4C15Q8NGM1 316 aa16.49■□□□□ 0.23
AGRN-208ENST00000479707 GNPDA2Q8TDQ7 276 aa16.49■□□□□ 0.23
AGRN-208ENST00000479707 NEUROG1Q92886 237 aa16.49■□□□□ 0.23
AGRN-208ENST00000479707 BOD1Q96IK1 185 aa16.49■□□□□ 0.23
AGRN-208ENST00000479707 FOXB1Q99853 325 aa16.49■□□□□ 0.23
AGRN-208ENST00000479707 MRPL13Q9BYD1 178 aaKnown RBP16.49■□□□□ 0.23
AGRN-208ENST00000479707 REEP1Q9H902 201 aa16.49■□□□□ 0.23
AGRN-208ENST00000479707 ADAM18Q9Y3Q7 739 aa16.49■□□□□ 0.23
AGRN-208ENST00000479707 SAMHD1Q9Y3Z3 626 aaKnown RBP16.49■□□□□ 0.23
AGRN-208ENST00000479707 RNF115Q9Y4L5 304 aa16.49■□□□□ 0.23
AGRN-208ENST00000479707 NAV2Q8IVL1 2488 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 ABCD4O14678 606 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 DHHO43323 396 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 CCNB2O95067 398 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 NDUFB2O95178 105 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 CST1P01037 141 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 IFNGR2P38484 337 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 CD47Q08722 323 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 TAF11Q15544 211 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 PGBD2Q6P3X8 592 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 TMEM108Q6UXF1 575 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 THSD4Q6ZMP0 1018 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 KBTBD8Q8NFY9 601 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 MAGEE2Q8TD90 523 aaPredicted RBP16.48■□□□□ 0.23
AGRN-208ENST00000479707 AKAP1Q92667 903 aaKnown RBP eCLIP16.48■□□□□ 0.23
AGRN-208ENST00000479707 HTRA1Q92743 480 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 Q96M85 177 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 TMEM204Q9BSN7 226 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 LRMDAQ9H2I8 198 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 CCM2LQ9NUG4 571 aaPredicted RBP16.48■□□□□ 0.23
AGRN-208ENST00000479707 GRHPRQ9UBQ7 328 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 ST6GALNAC2Q9UJ37 374 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 MAGED1Q9Y5V3 778 aaPredicted RBP16.48■□□□□ 0.23
AGRN-208ENST00000479707 HRNRQ86YZ3 2850 aaPredicted RBP16.48■□□□□ 0.23
AGRN-208ENST00000479707 POLQO75417 2590 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 CSMD1Q96PZ7 3565 aa16.48■□□□□ 0.23
AGRN-208ENST00000479707 CADP27708 2225 aa16.47■□□□□ 0.23
AGRN-208ENST00000479707 SPG11Q96JI7 2443 aa16.47■□□□□ 0.23
AGRN-208ENST00000479707 ARPC4-TTLL3A0A0A6YYG9 625 aa16.47■□□□□ 0.23
AGRN-208ENST00000479707 TCRBV3S1A0A5B6 114 aa16.47■□□□□ 0.23
AGRN-208ENST00000479707 ZNF503-AS2A6NEH8 195 aa16.47■□□□□ 0.23
AGRN-208ENST00000479707 NPIPB13A6NJU9 1138 aa16.47■□□□□ 0.23
AGRN-208ENST00000479707 NPIPB4C9JG80 1138 aa16.47■□□□□ 0.23
AGRN-208ENST00000479707 H7C1C5 153 aa16.47■□□□□ 0.23
AGRN-208ENST00000479707 GNGT2O14610 69 aa16.47■□□□□ 0.23
AGRN-208ENST00000479707 ARHGEF9O43307 516 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms