RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 MS4A3Q96HJ5 214 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 CCDC28BQ9BUN5 200 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 RBM4Q9BWF3 364 aaKnown RBP11.4□□□□□ -0.58
ABCF1-206ENST00000479542 ASPNQ9BXN1 380 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 TPK1Q9H3S4 243 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 TMEM38AQ9H6F2 299 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 TMEM27Q9HBJ8 222 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 SLC52A3Q9NQ40 469 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 G6PC2Q9NQR9 355 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 ZNF275Q9NSD4 429 aaPredicted RBP11.4□□□□□ -0.58
ABCF1-206ENST00000479542 SELENONQ9NZV5 590 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 PCDHB10Q9UN67 800 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 C5orf58C9J3I9 102 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 J3QLI3 93 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 PLPP3O14495 311 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 FMO6PO60774 539 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 SNAP29O95721 258 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 PNPP00491 289 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 NUDT7P0C024 238 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 HLA-DOBP13765 273 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 NQO1P15559 274 aaKnown RBP11.39□□□□□ -0.59
ABCF1-206ENST00000479542 GATA3P23771 443 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 STX1BP61266 288 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 HOXC5Q00444 222 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 TEKQ02763 1124 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 CAMK2DQ13557 499 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 CCNIQ14094 377 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 MOGQ16653 247 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 C6orf10Q5SRN2 563 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 GKAP1Q5VSY0 366 aaPredicted RBP11.39□□□□□ -0.59
ABCF1-206ENST00000479542 ACSM5Q6NUN0 579 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 RINLQ6ZS11 566 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 FUNDC1Q8IVP5 155 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 OR6X1Q8NH79 312 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 TMEM54Q969K7 222 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 YIPF5Q969M3 257 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 MAGEB18Q96M61 343 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 LRRC37BQ96QE4 947 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 ULBP2Q9BZM5 246 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 SLCO1C1Q9NYB5 712 aa11.39□□□□□ -0.59
ABCF1-206ENST00000479542 TENM1Q9UKZ4 2725 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 C17orf100A8MU93 164 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 PTHP01270 115 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 OR8G3PP0DMU2 310 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 GPX2P18283 190 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 CRYBB2P43320 205 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 ALDH3B1P43353 468 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 GIPRP48546 466 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 PTDSS1P48651 473 aaKnown RBP11.38□□□□□ -0.59
ABCF1-206ENST00000479542 SEC24CP53992 1094 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 PMS2P3Q13401 168 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 OR1Q1Q15612 314 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 TUSC1Q2TAM9 212 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 ZNF613Q6PF04 617 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 SLC2A7Q6PXP3 512 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 LSRQ86X29 649 aaPredicted RBP11.38□□□□□ -0.59
ABCF1-206ENST00000479542 C1orf174Q8IYL3 243 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 OR6N1Q8NGY5 312 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 OR5J2Q8NH18 312 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 ZNF519Q8TB69 540 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 MAL2Q969L2 176 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 TXNDC15Q96J42 360 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 ZNF607Q96SK3 696 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 EMC6Q9BV81 110 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 MED29Q9NX70 200 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 GLTPQ9NZD2 209 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 CORO2BQ9UQ03 480 aa11.38□□□□□ -0.59
ABCF1-206ENST00000479542 CENPBD1B2RD01 187 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 PPIHO43447 177 aaKnown RBP11.37□□□□□ -0.59
ABCF1-206ENST00000479542 TPST2O60704 377 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 SERPINB7O75635 380 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 SEC14L2O76054 403 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 B4GALT1P15291 398 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 EGR1P18146 543 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 EPHA1P21709 976 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 RAD52P43351 418 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 CSNK1A1P48729 337 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 CDK6Q00534 326 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 PIGFQ07326 219 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 RGS7BPQ6MZT1 257 aaPredicted RBP11.37□□□□□ -0.59
ABCF1-206ENST00000479542 SHQ1Q6PI26 577 aaKnown RBP11.37□□□□□ -0.59
ABCF1-206ENST00000479542 BLOC1S3Q6QNY0 202 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 C1orf229Q6ZS94 237 aaPredicted RBP11.37□□□□□ -0.59
ABCF1-206ENST00000479542 LRP11Q86VZ4 500 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 CARM1Q86X55 608 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 ZNF584Q8IVC4 421 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 SKA3Q8IX90 412 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 SLC22A24Q8N4F4 322 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 OR1J2Q8NGS2 313 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 RAB39BQ96DA2 213 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 THOC1Q96FV9 657 aaKnown RBP11.37□□□□□ -0.59
ABCF1-206ENST00000479542 SLC25A44Q96H78 314 aaPredicted RBP11.37□□□□□ -0.59
ABCF1-206ENST00000479542 SYT3Q9BQG1 590 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 BCL2L14Q9BZR8 327 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 HINT3Q9NQE9 182 aaKnown RBP11.37□□□□□ -0.59
ABCF1-206ENST00000479542 SLC25A37Q9NYZ2 338 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 TREM2Q9NZC2 230 aa11.37□□□□□ -0.59
ABCF1-206ENST00000479542 PPIAL4EA0A075B759 164 aa11.36□□□□□ -0.59
ABCF1-206ENST00000479542 TRBV5-3A0A0A0MS03 114 aa11.36□□□□□ -0.59
ABCF1-206ENST00000479542 PPIAL4CA0A0B4J2A2 164 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms