RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-215	ENST00000478702		A0A096LPE4	126 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702		A0A1W2PPZ6	126 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	ZNF99	A8MXY4	864 aa	Predicted RBP	13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702		M0R3G1	203 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	PIP5K1C	O60331	668 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	HIST1H2AB	P04908	130 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	HOXB1	P14653	301 aa	Predicted RBP	13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	IFNGR1	P15260	489 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	PAX7	P23759	505 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	IFNA8	P32881	189 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	BID	P55957	195 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	RPL18	Q07020	188 aa	Known RBP	13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	FXN	Q16595	210 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	TMEM249	Q2WGJ8	235 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	C11orf71	Q6IPW1	123 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	SLC22A25	Q6T423	547 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	SLC35D2	Q76EJ3	337 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	HIST3H2A	Q7L7L0	130 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	PGAM4	Q8N0Y7	254 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	RBM15B	Q8NDT2	890 aa	Known RBP	13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	LIPH	Q8WWY8	451 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	HIST1H2AC	Q93077	130 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	ADAD1	Q96M93	576 aa	Known RBP	13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	RHNO1	Q9BSD3	238 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	ULBP2	Q9BZM5	246 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	MOV10	Q9HCE1	1003 aa	Known RBP	13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	CRNN	Q9UBG3	495 aa	Predicted RBP	13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	EGFL7	Q9UHF1	273 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	RPS6KA6	Q9UK32	745 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	MED31	Q9Y3C7	131 aa		13.73	□□□□□ -0.21
GARNL3-215	ENST00000478702	IGHV1-18	A0A0C4DH31	117 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	ZNF726	A6NNF4	738 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702		J3KTA2	159 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	FFAR1	O14842	300 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	RNF13	O43567	381 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	SEC14L2	O76054	403 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	PRSS23	O95084	383 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	TSPAN19	P0C672	248 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	HSD17B1	P14061	328 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	FUT4	P22083	530 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	YAP1	P46937	504 aa	Known RBP	13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	CSNK1A1	P48729	337 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	TUBA1B	P68363	451 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	TUBA4A	P68366	448 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	MELK	Q14680	651 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	TRAM2	Q15035	370 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	C3orf36	Q3SXR2	165 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	TUBA1A	Q71U36	451 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	RNF148	Q8N7C7	305 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	OR6N1	Q8NGY5	312 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	OR6X1	Q8NH79	312 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	SLC38A2	Q96QD8	506 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	TNFRSF13C	Q96RJ3	184 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	CCT8L2	Q96SF2	557 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	FAIM	Q9NVQ4	179 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	ANK2	Q01484	3957 aa		13.72	□□□□□ -0.21
GARNL3-215	ENST00000478702	HTR3E	A5X5Y0	456 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	ZNF503-AS2	A6NEH8	195 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702		E7EQL1	145 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	ATP6V1G2-DDX39B	F2Z307	99 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	FAM107A	O95990	144 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	IGKV3-15	P01624	115 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	IGLV1-44	P01699	117 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	FUT1	P19526	365 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	LOXL1	Q08397	574 aa	Predicted RBP	13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	FKBP9P1	Q75LS8	142 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	ZNF627	Q7L945	461 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	TSEN54	Q7Z6J9	526 aa	Known RBP	13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	FAM169B	Q8N8A8	192 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	FAM156A	Q8NDB6	213 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	TMEM54	Q969K7	222 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	SLC25A44	Q96H78	314 aa	Predicted RBP	13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	KATNB1	Q9BVA0	655 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	FNDC11	Q9BVV2	318 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	CACNG6	Q9BXT2	260 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	TMEM160	Q9NX00	188 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	RHCG	Q9UBD6	479 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	CDC42EP3	Q9UKI2	254 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	POU2F3	Q9UKI9	436 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	SAMD4A	Q9UPU9	718 aa	Known RBP	13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	ENPP4	Q9Y6X5	453 aa		13.71	□□□□□ -0.21
GARNL3-215	ENST00000478702	NPIPB13	A6NJU9	1138 aa		13.7	□□□□□ -0.22
GARNL3-215	ENST00000478702	NPIPB4	C9JG80	1138 aa		13.7	□□□□□ -0.22
GARNL3-215	ENST00000478702	BLOC1S5-TXNDC5	H3BN57	136 aa		13.7	□□□□□ -0.22
GARNL3-215	ENST00000478702	F13B	P05160	661 aa		13.7	□□□□□ -0.22
GARNL3-215	ENST00000478702	CECR9	P0C854	216 aa		13.7	□□□□□ -0.22
GARNL3-215	ENST00000478702	PGA4	P0DJD7	388 aa		13.7	□□□□□ -0.22
GARNL3-215	ENST00000478702	PGA3	P0DJD8	388 aa		13.7	□□□□□ -0.22
GARNL3-215	ENST00000478702	IFI30	P13284	250 aa		13.7	□□□□□ -0.22
GARNL3-215	ENST00000478702	AQP2	P41181	271 aa		13.7	□□□□□ -0.22
GARNL3-215	ENST00000478702	NUDT6	P53370	316 aa		13.7	□□□□□ -0.22
GARNL3-215	ENST00000478702	LSM11	P83369	360 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
GARNL3-215	ENST00000478702	VLDLR	P98155	873 aa		13.7	□□□□□ -0.22
GARNL3-215	ENST00000478702	SAMD4B	Q5PRF9	694 aa	Known RBP	13.7	□□□□□ -0.22
GARNL3-215	ENST00000478702	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.7	□□□□□ -0.22
GARNL3-215	ENST00000478702	AGAP6	Q5VW22	663 aa		13.7	□□□□□ -0.22
GARNL3-215	ENST00000478702	GLYAT	Q6IB77	296 aa		13.7	□□□□□ -0.22
GARNL3-215	ENST00000478702	ZNF813	Q6ZN06	617 aa		13.7	□□□□□ -0.22
GARNL3-215	ENST00000478702	HDDC2	Q7Z4H3	204 aa		13.7	□□□□□ -0.22
GARNL3-215	ENST00000478702	NRM	Q8IXM6	262 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms