RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 IGHV3-15A0A0B4J1V0 119 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 LIPT2A6NK58 231 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 SLC22A20A6NK97 555 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 LRRN3E7EW58 273 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 G3V2T6 193 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 M0R082 166 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 SERPINI2O75830 405 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 AKR7A3O95154 331 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 ANPEPP15144 967 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 SLC25A16P16260 332 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 FUT4P22083 530 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 GRPRP30550 384 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 SUCLG1P53597 346 aaKnown RBP12.76□□□□□ -0.37
USP11-207ENST00000478596 PMS2P3Q13401 168 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 PON3Q15166 354 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 TRIP10Q15642 601 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 ZNF239Q16600 458 aaKnown RBP12.76□□□□□ -0.37
USP11-207ENST00000478596 MICAQ29983 383 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 HIST2H2BDQ6DRA6 164 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 FAM166AQ6J272 317 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 SHQ1Q6PI26 577 aaKnown RBP12.76□□□□□ -0.37
USP11-207ENST00000478596 CLEC2AQ6UVW9 174 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 TMPPEQ6ZT21 453 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 GPAT4Q86UL3 456 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 STK32CQ86UX6 486 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 OR4C15Q8NGM1 316 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 OR13C2Q8NGS9 318 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 MFSD8Q8NHS3 518 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 ZNF417Q8TAU3 575 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 FANK1Q8TC84 345 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 GNPDA2Q8TDQ7 276 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 ZFAND2BQ8WV99 257 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 EME1Q96AY2 570 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 ZNF587Q96SQ5 575 aaPredicted RBP12.76□□□□□ -0.37
USP11-207ENST00000478596 ZNF426Q9BUY5 554 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 SRXN1Q9BYN0 137 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 FKRPQ9H9S5 495 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 C20orf141Q9NUB4 165 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 ZNF229Q9UJW7 825 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 OAZ3Q9UMX2 235 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 RNF115Q9Y4L5 304 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 ORC6Q9Y5N6 252 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 CORINQ9Y5Q5 1042 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 NBEAL2Q6ZNJ1 2754 aa12.76□□□□□ -0.37
USP11-207ENST00000478596 SLC35F4A4IF30 521 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 UNC119BA6NIH7 251 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 EIF1BO60739 113 aaKnown RBP12.75□□□□□ -0.37
USP11-207ENST00000478596 IMPDH2P12268 514 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 GZMKP49863 264 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 EGR4Q05215 589 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 PRKCDQ05655 676 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 FAPQ12884 760 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 ZNF74Q16587 644 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 CTU2Q2VPK5 515 aaKnown RBP12.75□□□□□ -0.37
USP11-207ENST00000478596 PGGHGQ32M88 737 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 LINC00114Q6XXX2 140 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 FCRLAQ7L513 359 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 OAFQ86UD1 273 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 HS3ST5Q8IZT8 346 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 C3orf56Q8N813 242 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 MOGAT1Q96PD6 335 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 CIB1Q99828 191 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 TRAF4Q9BUZ4 470 aaPredicted RBP12.75□□□□□ -0.37
USP11-207ENST00000478596 PTDSS2Q9BVG9 487 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 CHODLQ9H9P2 273 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 MEPEQ9NQ76 525 aaPredicted RBP12.75□□□□□ -0.37
USP11-207ENST00000478596 MGAT4BQ9UQ53 548 aa12.75□□□□□ -0.37
USP11-207ENST00000478596 PRKDCP78527 4128 aaKnown RBP12.75□□□□□ -0.37
USP11-207ENST00000478596 TRAV27A0A087WT01 109 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 HTR3EA5X5Y0 456 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 C11orf98E9PRG8 122 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 BLOC1S5-TXNDC5H3BN57 136 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 RNF13O43567 381 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 DNPH1O43598 174 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 NPIPB7O75200 414 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 CD8AP01732 235 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 BGLAPP02818 100 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 ADORA3P0DMS8 318 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 FUT1P19526 365 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 AHCYP23526 432 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 LIMS1P48059 325 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 NUDT6P53370 316 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 CTBP2P56545 445 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 RAC3P60763 192 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 SIRPAP78324 504 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 C1DQ13901 141 aaKnown RBP12.74□□□□□ -0.37
USP11-207ENST00000478596 PGBD2Q6P3X8 592 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 TMEM179BQ7Z7N9 219 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 WFDC8Q8IUA0 241 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 OR52L1Q8NGH7 329 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 OR5J2Q8NH18 312 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 OR6S1Q8NH40 331 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 FNDC9Q8TBE3 224 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 ADGRG7Q96K78 797 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 C9orf16Q9BUW7 83 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 OR10A4Q9H209 315 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 VCXQ9H320 206 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 RNPEPL1Q9HAU8 725 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 KRT84Q9NSB2 600 aa12.74□□□□□ -0.37
USP11-207ENST00000478596 TBC1D23Q9NUY8 699 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms