RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 GPR139Q6DWJ6 353 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 NIPAL3Q6P499 406 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 LEG1Q6P5S2 330 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 PTCHD4Q6ZW05 846 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 USP51Q70EK9 711 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 CREB3L2Q70SY1 520 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 ADGRE4PQ86SQ3 457 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 FJX1Q86VR8 437 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 DEPDC4Q8N2C3 294 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 TCEANCQ8N8B7 351 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 C9orf106Q8NAJ2 232 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 CYB561A3Q8NBI2 242 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 SETD9Q8NE22 299 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 ZNF519Q8TB69 540 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 OTULINQ96BN8 352 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 ZNF385AQ96PM9 386 aaKnown RBP10.38□□□□□ -0.75
PDCD11-204ENST00000478543 SF3B5Q9BWJ5 86 aaKnown RBP10.38□□□□□ -0.75
PDCD11-204ENST00000478543 ANKRD60Q9BZ19 345 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 FN3KQ9H479 309 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 MED20Q9H944 212 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 CALHM2Q9HA72 323 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 FANCFQ9NPI8 374 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 ZNF226Q9NYT6 803 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 KLHL9Q9P2J3 617 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 KLHL21Q9UJP4 597 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 ING1Q9UK53 422 aaPredicted RBP10.38□□□□□ -0.75
PDCD11-204ENST00000478543 FLVCR1Q9Y5Y0 555 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 NAV3Q8IVL0 2385 aa10.38□□□□□ -0.75
PDCD11-204ENST00000478543 DNAJC13O75165 2243 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 LOC102725191A0A1B0GVB3 256 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 SLC35F4A4IF30 521 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 FAM183AA6NL82 134 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 ZNF726A6NNF4 738 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 XKRYO14609 159 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 TLX2O43763 284 aaPredicted RBP10.37□□□□□ -0.75
PDCD11-204ENST00000478543 IDH3BO43837 385 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 TXNDC12O95881 172 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 APEHP13798 732 aaKnown RBP10.37□□□□□ -0.75
PDCD11-204ENST00000478543 GABRA1P14867 456 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 ZNF3P17036 446 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 MYF6P23409 242 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 ACVR2AP27037 513 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 CDKN2AP42771 156 aaKnown RBP10.37□□□□□ -0.75
PDCD11-204ENST00000478543 SLC16A1P53985 500 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 SIRPAP78324 504 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 RUNX1T1Q06455 604 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 IL18R1Q13478 541 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 CAMK2DQ13557 499 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 CRMP1Q14194 572 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 RNPS1Q15287 305 aaKnown RBP10.37□□□□□ -0.75
PDCD11-204ENST00000478543 SF3B4Q15427 424 aaKnown RBP eCLIP10.37□□□□□ -0.752e-6■■■■■ 28.8
PDCD11-204ENST00000478543 ARMC4Q5T2S8 1044 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 NSUN5P2Q63ZY6 315 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 RTL6Q6ICC9 239 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 NHLRC1Q6VVB1 395 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.37□□□□□ -0.75
PDCD11-204ENST00000478543 BCDIN3DQ7Z5W3 292 aaKnown RBP10.37□□□□□ -0.75
PDCD11-204ENST00000478543 DOLPP1Q86YN1 238 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 TUSC5Q8IXB3 177 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 ENTHD1Q8IYW4 607 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 GCNT2Q8N0V5 402 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 RPRMLQ8N4K4 120 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 ARIH2OSQ8N7S6 290 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 ZIC4Q8N9L1 334 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 SYT14Q8NB59 555 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 SLC37A3Q8NCC5 494 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 CNIH3Q8TBE1 160 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 ITLN2Q8WWU7 325 aaPredicted RBP10.37□□□□□ -0.75
PDCD11-204ENST00000478543 HDAC2Q92769 488 aaKnown RBP10.37□□□□□ -0.75
PDCD11-204ENST00000478543 WNT2BQ93097 391 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 NMNAT3Q96T66 252 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 CMC2Q9NRP2 79 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 TINAGQ9UJW2 476 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 ZNF835Q9Y2P0 537 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 LRRC42Q9Y546 428 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 FAM215AQ9Y5M1 114 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 PKDREJQ9NTG1 2253 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 ZGRF1Q86YA3 2104 aa10.37□□□□□ -0.75
PDCD11-204ENST00000478543 SVILO95425 2214 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 IGKV3D-15A0A087WSY6 115 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 A6NIZ1 184 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 NPIPB13A6NJU9 1138 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 CD8B2A6NJW9 211 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 NPIPB4C9JG80 1138 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 DENRO43583 198 aaKnown RBP10.36□□□□□ -0.75
PDCD11-204ENST00000478543 AKAP8O43823 692 aaKnown RBP10.36□□□□□ -0.75
PDCD11-204ENST00000478543 TRMUO75648 421 aaKnown RBP10.36□□□□□ -0.75
PDCD11-204ENST00000478543 RENP00797 406 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 ACADSP16219 412 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 PTGER4P35408 488 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 SELENOPP49908 381 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 CLRN1P58418 232 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 RAP1BP61224 184 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 RAP1AP62834 184 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 CD47Q08722 323 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 ITGADQ13349 1161 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 MAD2L1BPQ15013 274 aaPredicted RBP10.36□□□□□ -0.75
PDCD11-204ENST00000478543 PDK3Q15120 406 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 FAM205BPQ63HN1 556 aa10.36□□□□□ -0.75
PDCD11-204ENST00000478543 GTF2IRD2BQ6EKJ0 949 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms