RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 C5orf58C9J3I9 102 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 HDAC3O15379 428 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 DEAF1O75398 565 aaPredicted RBP8.24□□□□□ -1.09
CCM2-210ENST00000478169 BGLAPP02818 100 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 ZNF250P15622 560 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 CBLP22681 906 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 HTR2AP28223 471 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 EPHA3P29320 983 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 MAGEB1P43366 347 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 KLF3P57682 345 aaPredicted RBP8.24□□□□□ -1.09
CCM2-210ENST00000478169 CCL8P80075 99 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 BST1Q10588 318 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 FOXL1Q12952 345 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 RGNQ15493 299 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 MOGQ16653 247 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 GTDC1Q4AE62 458 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 TMEM154Q6P9G4 183 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 SHISA2Q6UWI4 295 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 DPPA2Q7Z7J5 298 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 ZNF584Q8IVC4 421 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 SKA3Q8IX90 412 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 BPIFB2Q8N4F0 458 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 ZDHHC22Q8N966 263 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 SNX33Q8WV41 574 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 VPS33AQ96AX1 596 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 WDR55Q9H6Y2 383 aaPredicted RBP8.24□□□□□ -1.09
CCM2-210ENST00000478169 NTN4Q9HB63 628 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 SLCO1C1Q9NYB5 712 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 SELENONQ9NZV5 590 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 ZIM2Q9NZV7 527 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 TAAR3PQ9P1P4 343 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 TANC2Q9HCD6 1990 aa8.24□□□□□ -1.09
CCM2-210ENST00000478169 A0A0B4J2E0 115 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 IGHV1-69-2A0A0G2JMI3 117 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 A0A1B0GX12 115 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 CLIC1O00299 241 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 PLPP3O14495 311 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 TMPRSS2O15393 492 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 RGS16O15492 202 aaPredicted RBP8.23□□□□□ -1.09
CCM2-210ENST00000478169 CDC14BO60729 498 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 FARS2O95363 451 aaKnown RBP8.23□□□□□ -1.09
CCM2-210ENST00000478169 CLPTM1O96005 669 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 PTHP01270 115 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 IGHV2-5P01817 119 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 NUDT7P0C024 238 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 OR8G3PP0DMU2 310 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 AHCYP23526 432 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 FPR2P25090 351 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 RAD52P43351 418 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 CSNK1A1P48729 337 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 VSNL1P62760 191 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 UBA52P62987 128 aaKnown RBP8.23□□□□□ -1.09
CCM2-210ENST00000478169 MVKQ03426 396 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 KRT71Q3SY84 523 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 C6orf10Q5SRN2 563 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 AVPI1Q5T686 147 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 DCAF12L2Q5VW00 463 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 DHRS4L2Q6PKH6 230 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 TREML1Q86YW5 311 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 WDFY1Q8IWB7 410 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 SLC22A24Q8N4F4 322 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 SLC30A7Q8NEW0 376 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 OR1J2Q8NGS2 313 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 OR6X1Q8NH79 312 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 ZNF519Q8TB69 540 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 SYNPRQ8TBG9 265 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 AENQ8WTP8 325 aaKnown RBP8.23□□□□□ -1.09
CCM2-210ENST00000478169 C11orf40Q8WZ69 217 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 TMEM54Q969K7 222 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 MAL2Q969L2 176 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 TIMD4Q96H15 378 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 MOGAT1Q96PD6 335 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 SLC6A7Q99884 636 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 TMEM43Q9BTV4 400 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 SPATA5L1Q9BVQ7 753 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 RSPO3Q9BXY4 272 aaPredicted RBP8.23□□□□□ -1.09
CCM2-210ENST00000478169 BCL2L14Q9BZR8 327 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 C1orf198Q9H425 327 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 EVA1AQ9H8M9 152 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 TMEM27Q9HBJ8 222 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 CDH20Q9HBT6 801 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 ESM1Q9NQ30 184 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 SDR39U1Q9NRG7 319 aaPredicted RBP8.23□□□□□ -1.09
CCM2-210ENST00000478169 DDX28Q9NUL7 540 aaKnown RBP8.23□□□□□ -1.09
CCM2-210ENST00000478169 THAP1Q9NVV9 213 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 GLTPQ9NZD2 209 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 TESQ9UGI8 421 aaKnown RBP8.23□□□□□ -1.09
CCM2-210ENST00000478169 PCDHGB1Q9Y5G3 927 aa8.23□□□□□ -1.09
CCM2-210ENST00000478169 CLDN25C9JDP6 229 aa8.22□□□□□ -1.09
CCM2-210ENST00000478169 PRSS23O95084 383 aa8.22□□□□□ -1.09
CCM2-210ENST00000478169 SNAP29O95721 258 aa8.22□□□□□ -1.09
CCM2-210ENST00000478169 MT-ATP6P00846 226 aa8.22□□□□□ -1.09
CCM2-210ENST00000478169 FSHBP01225 129 aa8.22□□□□□ -1.09
CCM2-210ENST00000478169 MT-ND5P03915 603 aa8.22□□□□□ -1.09
CCM2-210ENST00000478169 LCKP06239 509 aa8.22□□□□□ -1.09
CCM2-210ENST00000478169 PATE4P0C8F1 98 aa8.22□□□□□ -1.09
CCM2-210ENST00000478169 FAM157BP0CG42 384 aa8.22□□□□□ -1.09
CCM2-210ENST00000478169 HKR1P10072 659 aa8.22□□□□□ -1.09
CCM2-210ENST00000478169 ADRA2CP18825 462 aa8.22□□□□□ -1.09
CCM2-210ENST00000478169 POLR2JP52435 117 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms