RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 CSMD2Q7Z408 3487 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 DPRXA6NFQ7 191 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 BLOC1S5-TXNDC5H3BN57 136 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 KPNA4O00629 521 aaPredicted RBP10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 KRT36O76013 467 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 BCL10O95999 233 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 IGKV3-15P01624 115 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 IGHG1P01857 330 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 IFI30P13284 250 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 HLA-DOBP13765 273 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 IFNGR1P15260 489 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 CD40P25942 277 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 ARR3P36575 388 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 CSNK1A1P48729 337 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 HMGA2P52926 109 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 FOXG1P55316 489 aaPredicted RBP10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 UBE2NP61088 152 aaKnown RBP10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 BSPH1Q075Z2 132 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 DEFB113Q30KQ7 82 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 TBRG1Q3YBR2 411 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 PRSS57Q6UWY2 283 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 ZNF730Q6ZMV8 503 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 LINGO2Q7L985 606 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 NRMQ8IXM6 262 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 PFN4Q8NHR9 129 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 RSRC1Q96IZ7 334 aaKnown RBP10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 ALKBH3Q96Q83 286 aaPredicted RBP10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 FUZQ9BT04 418 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 CHID1Q9BWS9 393 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 MRPL13Q9BYD1 178 aaKnown RBP10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 TXNIPQ9H3M7 391 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 GLTPQ9NZD2 209 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 V9GYQ6 96 aa10.82□□□□□ -0.68
CLCNKA-205ENST00000477360 EFCAB9A8MZ26 197 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 J3KTA2 159 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 hCG_2039718K7EN88 272 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 CLOCKO15516 846 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 FKBP6O75344 327 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 IGLV1-44P01699 117 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 PGA4P0DJD7 388 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 PGA3P0DJD8 388 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 SAGP10523 405 aaPredicted RBP10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 CBR1P16152 277 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 CBLP22681 906 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 IFNGR2P38484 337 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 LIMS1P48059 325 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 BIDP55957 195 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 ARF1P84077 181 aaKnown RBP10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 CEACAM16Q2WEN9 425 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 ZNF672Q499Z4 452 aaPredicted RBP10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 ALG10Q5BKT4 473 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 C10orf128Q5T292 105 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 ARMC4Q5T2S8 1044 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 OR2T5Q6IEZ7 315 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 OAFQ86UD1 273 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 OR6N1Q8NGY5 312 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 OR2T29Q8NH02 315 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 FBXW5Q969U6 566 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 GTPBP3Q969Y2 492 aaKnown RBP10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 TXNDC15Q96J42 360 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 ALG12Q9BV10 488 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 KATNB1Q9BVA0 655 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 ULBP2Q9BZM5 246 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 NELFAQ9H3P2 528 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 MED29Q9NX70 200 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 NPAP1Q9NZP6 1156 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 FBXO9Q9UK97 447 aaPredicted RBP10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 AURKCQ9UQB9 309 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 AP4S1Q9Y587 144 aa10.81□□□□□ -0.68
CLCNKA-205ENST00000477360 ROS1P08922 2347 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 A6NIZ1 184 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 MCIDASD6RGH6 385 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 C11orf98E9PRG8 122 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 FCGR1AP12314 374 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 APEHP13798 732 aaKnown RBP10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 ACADSP16219 412 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 AQP2P41181 271 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 YAP1P46937 504 aaKnown RBP10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 RAP1BP61224 184 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 RAP1AP62834 184 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 CAMK2DQ13557 499 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 ZNF544Q6NX49 715 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 PODNL1Q6PEZ8 512 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 ZNF771Q7L3S4 317 aaPredicted RBP10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 OR52N5Q8NH56 324 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 LILRB1Q8NHL6 650 aaPredicted RBP10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 ASB10Q8WXI3 467 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 NANOS1Q8WY41 292 aaKnown RBP10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 GPX7Q96SL4 187 aaPredicted RBP10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 CCL19Q99731 98 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 WACQ9BTA9 647 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 EMC6Q9BV81 110 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 GSX2Q9BZM3 304 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 LIME1Q9H400 295 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 ZNF701Q9NV72 531 aaPredicted RBP10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 POFUT2Q9Y2G5 429 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 PLEKHA6Q9Y2H5 1048 aa10.8□□□□□ -0.68
CLCNKA-205ENST00000477360 SH3PXD2BA1X283 911 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 SHISA9B4DS77 424 aa10.79□□□□□ -0.68
CLCNKA-205ENST00000477360 ANKRD65E5RJM6 399 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms