RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 FRMD1Q8N878 549 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 BHLHE23Q8NDY6 225 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 IFI44Q8TCB0 444 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 DVL3Q92997 716 aaPredicted RBP17.15■□□□□ 0.34
VARS2-209ENST00000477288 ABHD6Q9BV23 337 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 WASH6PQ9NQA3 447 aa17.15■□□□□ 0.34
VARS2-209ENST00000477288 BTBD17A6NE02 478 aa17.14■□□□□ 0.34
VARS2-209ENST00000477288 EIF1P41567 113 aaKnown RBP17.14■□□□□ 0.34
VARS2-209ENST00000477288 ZNF750Q32MQ0 723 aa17.14■□□□□ 0.34
VARS2-209ENST00000477288 SLC38A5Q8WUX1 472 aa17.14■□□□□ 0.34
VARS2-209ENST00000477288 KCNJ15Q99712 375 aa17.14■□□□□ 0.34
VARS2-209ENST00000477288 WDR76Q9H967 626 aa17.14■□□□□ 0.34
VARS2-209ENST00000477288 MMACHCQ9Y4U1 282 aa17.14■□□□□ 0.34
VARS2-209ENST00000477288 SETD1AO15047 1707 aaKnown RBP17.14■□□□□ 0.33
VARS2-209ENST00000477288 SPINT2O43291 252 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 BTN1A1Q13410 526 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 GDPD3Q7L5L3 318 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 CCDC71Q8IV32 467 aaPredicted RBP17.14■□□□□ 0.33
VARS2-209ENST00000477288 FGGYQ96C11 551 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 SLC22A12Q96S37 553 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 LANCL2Q9NS86 450 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 OBP2AQ9NY56 170 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 A0A0D9SG52 128 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 I6L893 689 aaPredicted RBP17.14■□□□□ 0.33
VARS2-209ENST00000477288 ADPRMQ3LIE5 342 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 PHLDA2Q53GA4 152 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 ZNF705AQ6ZN79 300 aaPredicted RBP17.14■□□□□ 0.33
VARS2-209ENST00000477288 RFPL4BQ6ZWI9 263 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 SLC46A3Q7Z3Q1 461 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 CNTN4Q8IWV2 1026 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 OR5AS1Q8N127 324 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 EMG1Q92979 244 aaKnown RBP17.14■□□□□ 0.33
VARS2-209ENST00000477288 RANGRFQ9HD47 186 aaPredicted RBP17.14■□□□□ 0.33
VARS2-209ENST00000477288 A0A1B0GX78 115 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 CTDSP2O14595 271 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 MBOAT2Q6ZWT7 520 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 C15orf54Q8N8G6 183 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 TMEM104Q8NE00 496 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 PCNPQ8WW12 178 aaKnown RBP17.14■□□□□ 0.33
VARS2-209ENST00000477288 NRIP3Q9NQ35 241 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 TEX51A0A1B0GUA7 166 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 F11P03951 625 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 KIR2DL3P43628 341 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 GPLD1P80108 840 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 SIRT6Q8N6T7 355 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 C1QTNF6Q9BXI9 259 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 SEMA4GQ9NTN9 838 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 SLAMF8Q9P0V8 285 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 EMCNQ9ULC0 261 aa17.14■□□□□ 0.33
VARS2-209ENST00000477288 M0QYG6 137 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 GABRB3P28472 473 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 TRHRP34981 398 aaPredicted RBP17.13■□□□□ 0.33
VARS2-209ENST00000477288 GDNFP39905 211 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 PGBD5Q8N414 524 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 KLHDC9Q8NEP7 349 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 SPPL3Q8TCT6 385 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 GAB3Q8WWW8 586 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 UTP4Q969X6 686 aaKnown RBP17.13■□□□□ 0.33
VARS2-209ENST00000477288 DCLRE1CQ96SD1 692 aaKnown RBP17.13■□□□□ 0.33
VARS2-209ENST00000477288 NAV1Q8NEY1 1877 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 F6UZH7 168 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 HS3ST1O14792 307 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 PPP3CBP16298 524 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 SLC35A2P78381 396 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 GALEQ14376 348 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 HSF5Q4G112 596 aaPredicted RBP17.13■□□□□ 0.33
VARS2-209ENST00000477288 DEFB123Q8N688 67 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 APH1AQ96BI3 265 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 DEFB127Q9H1M4 99 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 PIGLQ9Y2B2 252 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 OR5H15A6NDH6 313 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 OR5H14A6NHG9 310 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 OR5H1A6NKK0 313 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 DHRS4L1P0CG22 281 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 KCNG3Q8TAE7 436 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 GHSRQ92847 366 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 CCDC74AQ96AQ1 378 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 TIMD4Q96H15 378 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 MFRPQ9BY79 579 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 ALS2Q96Q42 1657 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 TPMTP51580 245 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 LPCAT3Q6P1A2 487 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 NLRP8Q86W28 1048 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 OR1S2Q8NGQ3 325 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 NIPAL2Q9H841 368 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 UBR2Q8IWV8 1755 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 HBE1P02100 147 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 RAP2BP61225 183 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 MPPED2Q15777 294 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.13■□□□□ 0.33
VARS2-209ENST00000477288 TMEM106AQ96A25 262 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 SLC39A13Q96H72 371 aa17.13■□□□□ 0.33
VARS2-209ENST00000477288 TMEM221A6NGB7 291 aa17.12■□□□□ 0.33
VARS2-209ENST00000477288 SHC1P29353 583 aa17.12■□□□□ 0.33
VARS2-209ENST00000477288 GIPRP48546 466 aa17.12■□□□□ 0.33
VARS2-209ENST00000477288 OR6V1Q8N148 313 aa17.12■□□□□ 0.33
VARS2-209ENST00000477288 TCEAL7Q9BRU2 100 aa17.12■□□□□ 0.33
VARS2-209ENST00000477288 H0YIV9 168 aa17.12■□□□□ 0.33
VARS2-209ENST00000477288 K7EQM0 130 aa17.12■□□□□ 0.33
VARS2-209ENST00000477288 GABRA5P31644 462 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms