RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 GPAT4Q86UL3 456 aa12.91□□□□□ -0.34
COL4A6-206ENST00000477085 ZBTB46Q86UZ6 589 aa12.91□□□□□ -0.34
COL4A6-206ENST00000477085 SYT14Q8NB59 555 aa12.91□□□□□ -0.34
COL4A6-206ENST00000477085 SPRYD4Q8WW59 207 aaPredicted RBP12.91□□□□□ -0.34
COL4A6-206ENST00000477085 KCNK17Q96T54 332 aa12.91□□□□□ -0.34
COL4A6-206ENST00000477085 TSC22D3Q99576 134 aa12.91□□□□□ -0.34
COL4A6-206ENST00000477085 ARHGAP9Q9BRR9 750 aa12.91□□□□□ -0.34
COL4A6-206ENST00000477085 CCDC86Q9H6F5 360 aaKnown RBP12.91□□□□□ -0.34
COL4A6-206ENST00000477085 COPS3Q9UNS2 423 aa12.91□□□□□ -0.34
COL4A6-206ENST00000477085 MSRB2Q9Y3D2 182 aa12.91□□□□□ -0.34
COL4A6-206ENST00000477085 FREM3P0C091 2139 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 IGLV1-36A0A0B4J1U3 117 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 IGKV1D-43A0A0B4J1Z2 117 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 LOC102725191A0A1B0GVB3 256 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 NPIPA5E9PKD4 350 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 KLRC4-KLRK1H3BQV0 150 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 XKRYO14609 159 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 MAGEB4O15481 346 aaPredicted RBP12.9□□□□□ -0.34
COL4A6-206ENST00000477085 GABARAPO95166 117 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 BCL10O95999 233 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 RENP00797 406 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 ITGB2P05107 769 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 CTLA4P16410 223 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 GADD45AP24522 165 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 TGFBR1P36897 503 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 AGFG1P52594 562 aaKnown RBP12.9□□□□□ -0.34
COL4A6-206ENST00000477085 BIDP55957 195 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 LGALS3BPQ08380 585 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 GALEQ14376 348 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 TMEM225Q6GV28 225 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 ZNF322Q6U7Q0 402 aaPredicted RBP12.9□□□□□ -0.34
COL4A6-206ENST00000477085 TRILQ7L0X0 811 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 TIGD4Q8IY51 512 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 UBQLNLQ8IYU4 475 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 SNIP1Q8TAD8 396 aaKnown RBP12.9□□□□□ -0.34
COL4A6-206ENST00000477085 FOXN4Q96NZ1 517 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 OXGR1Q96P68 337 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 SNX18Q96RF0 628 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 CNN2Q99439 309 aaKnown RBP12.9□□□□□ -0.34
COL4A6-206ENST00000477085 ALG8Q9BVK2 526 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 MRPL13Q9BYD1 178 aaKnown RBP12.9□□□□□ -0.34
COL4A6-206ENST00000477085 TSPAN10Q9H1Z9 355 aaPredicted RBP12.9□□□□□ -0.34
COL4A6-206ENST00000477085 SLC6A15Q9H2J7 730 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 RERGLQ9H628 205 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 CHCHD3Q9NX63 227 aaKnown RBP12.9□□□□□ -0.34
COL4A6-206ENST00000477085 KLHL13Q9P2N7 655 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 ZMIZ1Q9ULJ6 1067 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 NPIPA1Q9UND3 350 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 MOKQ9UQ07 419 aa12.9□□□□□ -0.34
COL4A6-206ENST00000477085 DAPL1A0PJW8 107 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 TVP23AA6NH52 213 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 PRR32B1ATL7 298 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 EIF1AYO14602 144 aaKnown RBP12.89□□□□□ -0.35
COL4A6-206ENST00000477085 SEC14L5O43304 696 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 SLC16A7O60669 478 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 LHX2P50458 406 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 DAP3P51398 398 aaKnown RBP12.89□□□□□ -0.35
COL4A6-206ENST00000477085 LSM3P62310 102 aaKnown RBP12.89□□□□□ -0.35
COL4A6-206ENST00000477085 PPIAP62937 165 aaKnown RBP12.89□□□□□ -0.35
COL4A6-206ENST00000477085 PLGLB1Q02325 96 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 FMODQ06828 376 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 POU4F2Q12837 409 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 SPCS2Q15005 226 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 SOWAHCQ53LP3 525 aaPredicted RBP12.89□□□□□ -0.35
COL4A6-206ENST00000477085 P2RY8Q86VZ1 359 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 UEVLDQ8IX04 471 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 POMGNT2Q8NAT1 580 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 OR2T4Q8NH00 348 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 RAB2BQ8WUD1 216 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 SMAD5Q99717 465 aaKnown RBP12.89□□□□□ -0.35
COL4A6-206ENST00000477085 OR51E2Q9H255 320 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 WDR76Q9H967 626 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 B4GALT7Q9UBV7 327 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 NOX1Q9Y5S8 564 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 A0A1W2PPW3 197 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 GJE1A6NN92 205 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 SMAD9O15198 467 aaKnown RBP12.89□□□□□ -0.35
COL4A6-206ENST00000477085 WISP2O76076 250 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 POU3F2P20265 443 aaPredicted RBP12.89□□□□□ -0.35
COL4A6-206ENST00000477085 CARD18P57730 90 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 RAC3P60763 192 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 PMP22Q01453 160 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 MLLT11Q13015 90 aaPredicted RBP12.89□□□□□ -0.35
COL4A6-206ENST00000477085 LCN1P1Q5VSP4 162 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 HBMQ6B0K9 141 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 ESPNLQ6ZVH7 1005 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 PHC2Q8IXK0 858 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 SLC35F2Q8IXU6 374 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 KLHL36Q8N4N3 616 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 ZFP41Q8N8Y5 198 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 OR52N1Q8NH53 320 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 TTTY10Q9BZA0 68 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 KLHDC2Q9Y2U9 406 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 CAB39Q9Y376 341 aaPredicted RBP12.89□□□□□ -0.35
COL4A6-206ENST00000477085 LIPGQ9Y5X9 500 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 FKBP7Q9Y680 259 aa12.89□□□□□ -0.35
COL4A6-206ENST00000477085 SIRT4Q9Y6E7 314 aaPredicted RBP12.89□□□□□ -0.35
COL4A6-206ENST00000477085 CEP295Q9C0D2 2601 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 MGAQ8IWI9 3026 aa12.88□□□□□ -0.35
COL4A6-206ENST00000477085 SLC35F4A4IF30 521 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms