RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 POLR2J3Q9H1A7 115 aaKnown RBP9.34□□□□□ -0.91
SEC13-214ENST00000476597 NOX3Q9HBY0 568 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 ZNF446Q9NWS9 450 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 GID8Q9NWU2 228 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 GLTPQ9NZD2 209 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 ZNF224Q9NZL3 707 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 BAG5Q9UL15 447 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 FKBP7Q9Y680 259 aa9.34□□□□□ -0.91
SEC13-214ENST00000476597 KPNA4O00629 521 aaPredicted RBP9.33□□□□□ -0.92
SEC13-214ENST00000476597 RNF13O43567 381 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 OR5F1O95221 314 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 IGF2P01344 180 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 IFNA14P01570 189 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 MT-ND1P03886 318 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 VIMP08670 466 aaKnown RBP9.33□□□□□ -0.92
SEC13-214ENST00000476597 CD79AP11912 226 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 ZNF35P13682 527 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 B4GALT1P15291 398 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 FUT1P19526 365 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 TNFRSF1BP20333 461 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 KDELR2P33947 212 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 RBM34P42696 430 aaKnown RBP9.33□□□□□ -0.92
SEC13-214ENST00000476597 GIPRP48546 466 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 LSM11P83369 360 aaKnown RBP eCLIP9.33□□□□□ -0.92
SEC13-214ENST00000476597 PIN1Q13526 163 aaPredicted RBP9.33□□□□□ -0.92
SEC13-214ENST00000476597 DAG1Q14118 895 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 C6orf52Q5T4I8 152 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 SPATA21Q7Z572 469 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 SKA3Q8IX90 412 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 PCYOX1LQ8NBM8 494 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 FGFBP3Q8TAT2 258 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 LIPHQ8WWY8 451 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 ZNF566Q969W8 418 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 FOXN4Q96NZ1 517 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 RAB1BQ9H0U4 201 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 HEATR1Q9H583 2144 aaKnown RBP9.33□□□□□ -0.92
SEC13-214ENST00000476597 CCDC134Q9H6E4 229 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 MYOZ1Q9NP98 299 aaPredicted RBP9.33□□□□□ -0.92
SEC13-214ENST00000476597 RIMS3Q9UJD0 308 aa9.33□□□□□ -0.92
SEC13-214ENST00000476597 LOC390937A0A1W2PQ73 354 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 BLOC1S5-TXNDC5H3BN57 136 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 hCG_2039718K7EN88 272 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 SLC22A2O15244 555 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 DHHO43323 396 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 BCL10O95999 233 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 IGFBP1P08833 259 aaPredicted RBP9.32□□□□□ -0.92
SEC13-214ENST00000476597 PGA4P0DJD7 388 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 PGA3P0DJD8 388 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 IGHV4-31P0DP07 118 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 THRBP10828 461 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 UMPSP11172 480 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 GLRXP35754 106 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 NR4A2P43354 598 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 OR1E2P47887 323 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 PTDSS1P48651 473 aaKnown RBP9.32□□□□□ -0.92
SEC13-214ENST00000476597 EVX1P49640 407 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 UGT2B15P54855 530 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 TAS2R41P59536 307 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 GUCY1A3Q02108 690 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 SNTB2Q13425 540 aaKnown RBP9.32□□□□□ -0.92
SEC13-214ENST00000476597 MELKQ14680 651 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 HIST3H3Q16695 136 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 CYBRD1Q53TN4 286 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 CYB5R2Q6BCY4 276 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 KRT80Q6KB66 452 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 DEF8Q6ZN54 512 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 NANOGNBQ7Z5D8 188 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 ZCCHC24Q8N2G6 241 aaKnown RBP9.32□□□□□ -0.92
SEC13-214ENST00000476597 SVOPLQ8N434 492 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 SLC22A24Q8N4F4 322 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 PFN4Q8NHR9 129 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 TMEM255BQ8WV15 326 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 TMEM239Q8WW34 195 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 NEU4Q8WWR8 484 aaPredicted RBP9.32□□□□□ -0.92
SEC13-214ENST00000476597 SEPHS2Q99611 448 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 PIMREGQ9BSJ6 248 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 MRPL13Q9BYD1 178 aaKnown RBP9.32□□□□□ -0.92
SEC13-214ENST00000476597 TMEM160Q9NX00 188 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 CMTM6Q9NX76 183 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 CMAHPQ9Y471 501 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 SPEF1Q9Y4P9 236 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 CAPN7Q9Y6W3 813 aa9.32□□□□□ -0.92
SEC13-214ENST00000476597 SH3PXD2BA1X283 911 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 FAM220BPB1ANY3 271 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 CENPBD1B2RD01 187 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 SHOX2O60902 331 aaPredicted RBP9.31□□□□□ -0.92
SEC13-214ENST00000476597 OR7A10O76100 309 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 UBL3O95164 117 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 STAMBPO95630 424 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 RAB36O95755 333 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 SERPINA5P05154 406 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 F13BP05160 661 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 QDPRP09417 244 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 TSPAN19P0C672 248 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 PATE4P0C8F1 98 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 OR8G3PP0DMU2 310 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 AQP2P41181 271 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 GZMKP49863 264 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 SELENOWP63302 87 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 RUNX1T1Q06455 604 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms