RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ATP5SQ99766 215 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 OR51M1Q9H341 326 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 NANOGQ9H9S0 305 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 NEK6Q9HC98 313 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 FGF20Q9NP95 211 aaPredicted RBP3.97□□□□□ -1.77
VPS50-212ENST00000476413 RPS6KB2Q9UBS0 482 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 PACSIN2Q9UNF0 486 aaPredicted RBP3.97□□□□□ -1.77
VPS50-212ENST00000476413 CELA1Q9UNI1 258 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 TRAPPC4Q9Y296 219 aa3.97□□□□□ -1.77
VPS50-212ENST00000476413 A0A1B0GVI7 797 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 C9JVG2 144 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 CLOCKO15516 846 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 EIF3GO75821 320 aaKnown RBP eCLIP3.96□□□□□ -1.78
VPS50-212ENST00000476413 FTH1P02794 183 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 GIPP09681 153 aaPredicted RBP3.96□□□□□ -1.78
VPS50-212ENST00000476413 IGHV3-43DP0DP04 118 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 SFTPCP11686 197 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 SH3BGRP55822 239 aaPredicted RBP3.96□□□□□ -1.78
VPS50-212ENST00000476413 ZNF92Q03936 586 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 PSG5Q15238 335 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 CHRNA6Q15825 494 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 SGCAQ16586 387 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 ZNF621Q6ZSS3 439 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 FAM71E2Q8N5Q1 922 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 OR10G9Q8NGN4 311 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 OR2G3Q8NGZ4 309 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 PIBF1Q8WXW3 757 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 SLC38A4Q969I6 547 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 DUS3LQ96G46 650 aaKnown RBP3.96□□□□□ -1.78
VPS50-212ENST00000476413 ADAM22Q9P0K1 906 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 VANGL2Q9ULK5 521 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 F11RQ9Y624 299 aaKnown RBP3.96□□□□□ -1.78
VPS50-212ENST00000476413 CNTNAP1P78357 1384 aa3.96□□□□□ -1.78
VPS50-212ENST00000476413 NINLQ9Y2I6 1382 aa3.95□□□□□ -1.78
VPS50-212ENST00000476413 A0A075B6Q4 140 aa3.95□□□□□ -1.78
VPS50-212ENST00000476413 WI2-2373I1.2A0A1W2PRP0 233 aa3.95□□□□□ -1.78
VPS50-212ENST00000476413 RAB29O14966 203 aa3.95□□□□□ -1.78
VPS50-212ENST00000476413 MRPS12O15235 138 aaKnown RBP3.95□□□□□ -1.78
VPS50-212ENST00000476413 OR2J3O76001 311 aa3.95□□□□□ -1.78
VPS50-212ENST00000476413 CLPXO76031 633 aa3.95□□□□□ -1.78
VPS50-212ENST00000476413 RFX3P48380 749 aa3.95□□□□□ -1.78
VPS50-212ENST00000476413 RORCP51449 518 aa3.95□□□□□ -1.78
VPS50-212ENST00000476413 CRISP3P54108 245 aa3.95□□□□□ -1.78
VPS50-212ENST00000476413 GUCA2BQ16661 112 aa3.95□□□□□ -1.78
VPS50-212ENST00000476413 FRMPD2BQ6IN97 320 aa3.95□□□□□ -1.78
VPS50-212ENST00000476413 TMEM135Q86UB9 458 aa3.95□□□□□ -1.78
VPS50-212ENST00000476413 OR52K2Q8NGK3 314 aa3.95□□□□□ -1.78
VPS50-212ENST00000476413 OR1N2Q8NGR9 330 aa3.95□□□□□ -1.78
VPS50-212ENST00000476413 TGS1Q96RS0 853 aaKnown RBP3.95□□□□□ -1.78
VPS50-212ENST00000476413 CHP1Q99653 195 aa3.95□□□□□ -1.78
VPS50-212ENST00000476413 TMEM185BQ9H7F4 350 aa3.95□□□□□ -1.78
VPS50-212ENST00000476413 ZNF160Q9HCG1 818 aa3.95□□□□□ -1.78
VPS50-212ENST00000476413 NYAP2Q9P242 653 aa3.95□□□□□ -1.78
VPS50-212ENST00000476413 TRBV11-1A0A0K0K1C0 115 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 PPP1R2P9O14990 202 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 CACNG3O60359 315 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 KLHL41O60662 606 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 CTAG2O75638 210 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 ANXA5P08758 320 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 CSF3P09919 207 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 GALP22466 123 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 OTX1P32242 354 aaPredicted RBP3.94□□□□□ -1.78
VPS50-212ENST00000476413 AQP2P41181 271 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 TMED10P49755 219 aaKnown RBP3.94□□□□□ -1.78
VPS50-212ENST00000476413 UGT2B15P54855 530 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 RPS15P62841 145 aaKnown RBP3.94□□□□□ -1.78
VPS50-212ENST00000476413 AQP6Q13520 282 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 C2orf83Q53S99 150 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 SPANXN2Q5MJ10 180 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 OR4C5Q8NGB2 326 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 RNF138Q8WVD3 245 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 ZNF578Q96N58 590 aaPredicted RBP3.94□□□□□ -1.78
VPS50-212ENST00000476413 SLC29A1Q99808 456 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 SLC25A37Q9NYZ2 338 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 PITPNC1Q9UKF7 332 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 NEU3Q9UQ49 428 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 CDC42BPBQ9Y5S2 1711 aa3.94□□□□□ -1.78
VPS50-212ENST00000476413 CEMIPQ8WUJ3 1361 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 USP47Q96K76 1375 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 SERTM2A0A1B0GWG4 89 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 PEX7O00628 323 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 EIF3HO15372 352 aaKnown RBP eCLIP3.93□□□□□ -1.78
VPS50-212ENST00000476413 CHST1O43916 411 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 CDH16O75309 829 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 OR2F2O95006 317 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 NAA10P41227 235 aaPredicted RBP3.93□□□□□ -1.78
VPS50-212ENST00000476413 CDKN1BP46527 198 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 ATP5OP48047 213 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 LHX2P50458 406 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 SSR4P51571 173 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 CCR8P51685 355 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 TMEM220Q6QAJ8 160 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 LINC00173Q6ZV60 143 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 MMAAQ8IVH4 418 aaKnown RBP3.93□□□□□ -1.78
VPS50-212ENST00000476413 PDIK1LQ8N165 341 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 CCDC148Q8NFR7 591 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 SDR42E1Q8WUS8 393 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 NRGNQ92686 78 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 CCDC126Q96EE4 140 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 AURKBQ96GD4 344 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms