RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 ZNRF4Q8WWF5 429 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 RASD2Q96D21 266 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 DGCR14Q96DF8 476 aaKnown RBP5.91□□□□□ -1.46
ATG4A-207ENST00000474825 YIPF6Q96EC8 236 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 JSRP1Q96MG2 331 aaPredicted RBP5.91□□□□□ -1.46
ATG4A-207ENST00000474825 COG8Q96MW5 612 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 OR5B2Q96R09 309 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 NMNAT3Q96T66 252 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 TIMP4Q99727 224 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 BCL7BQ9BQE9 202 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 ALG12Q9BV10 488 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 ADGRL4Q9HBW9 690 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 VCX3AQ9NNX9 186 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 KLHL1Q9NR64 748 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 ASB6Q9NWX5 421 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 H2AFY2Q9P0M6 372 aaPredicted RBP5.91□□□□□ -1.46
ATG4A-207ENST00000474825 GRHPRQ9UBQ7 328 aa5.91□□□□□ -1.46
ATG4A-207ENST00000474825 RALYQ9UKM9 306 aaKnown RBP5.91□□□□□ -1.46
ATG4A-207ENST00000474825 EXOSC1Q9Y3B2 195 aaKnown RBP5.91□□□□□ -1.46
ATG4A-207ENST00000474825 USP24Q9UPU5 2620 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 IGKV3D-15A0A087WSY6 115 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 A0A087WV48 116 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 A0A1W2PRG6 482 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 H3BSA7 217 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 SULT2B1O00204 365 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 SMAD9O15198 467 aaKnown RBP5.9□□□□□ -1.46
ATG4A-207ENST00000474825 RNF13O43567 381 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 AKR7A3O95154 331 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 OR6A2O95222 327 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 BCL10O95999 233 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 RENP00797 406 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 LCKP06239 509 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 OR2T7P0C7T2 308 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 CLUP10909 449 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 COL8A1P27658 744 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 TGFBR2P37173 567 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 MAGEA5P43359 124 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 CAPZA2P47755 286 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 BLVRAP53004 296 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 SUCLG1P53597 346 aaKnown RBP5.9□□□□□ -1.46
ATG4A-207ENST00000474825 TMBIM6P55061 237 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 CLDN18P56856 261 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 CLDN20P56880 219 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 OR2B6P58173 313 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 PPIAP62937 165 aaKnown RBP5.9□□□□□ -1.46
ATG4A-207ENST00000474825 RUNX1T1Q06455 604 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 TPBGQ13641 420 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 DOC2BQ14184 412 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 SLC17A1Q14916 467 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 SLC10A1Q14973 349 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 PON3Q15166 354 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 PCK2Q16822 640 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 TEX30Q5JUR7 227 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 WIPI1Q5MNZ9 446 aaPredicted RBP5.9□□□□□ -1.46
ATG4A-207ENST00000474825 ZNF684Q5T5D7 378 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 LCN1P1Q5VSP4 162 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 VASNQ6EMK4 673 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 ABLIM2Q6H8Q1 611 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 LEG1Q6P5S2 330 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 CREB3L2Q70SY1 520 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 SLC35D2Q76EJ3 337 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 TRILQ7L0X0 811 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 GPR141Q7Z602 305 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.9□□□□□ -1.46
ATG4A-207ENST00000474825 SLC22A16Q86VW1 577 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 ANKRD13BQ86YJ7 626 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 WDFY1Q8IWB7 410 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 TIGD4Q8IY51 512 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 ACBD7Q8N6N7 88 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 ZIC4Q8N9L1 334 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 CYB561A3Q8NBI2 242 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 FAM98AQ8NCA5 519 aaKnown RBP5.9□□□□□ -1.46
ATG4A-207ENST00000474825 OR4F15Q8NGB8 312 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 OR2T4Q8NH00 348 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 OR2T27Q8NH04 317 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 OR2V1Q8NHB1 315 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 OR14L1PQ8NHC6 308 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 FNDC8Q8TC99 324 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 SMPDL3BQ92485 455 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 TM9SF4Q92544 642 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 RORBQ92753 470 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 ADAD1Q96M93 576 aaKnown RBP5.9□□□□□ -1.46
ATG4A-207ENST00000474825 SFXN2Q96NB2 322 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 MNTQ99583 582 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 NAA11Q9BSU3 229 aaPredicted RBP5.9□□□□□ -1.46
ATG4A-207ENST00000474825 MND1Q9BWT6 205 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 SRXN1Q9BYN0 137 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 CCDC90BQ9GZT6 254 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 MED20Q9H944 212 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 RNF122Q9H9V4 155 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 PAQR5Q9NXK6 330 aaPredicted RBP5.9□□□□□ -1.46
ATG4A-207ENST00000474825 CLEC2DQ9UHP7 191 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 B9D1Q9UPM9 204 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 ERGIC3Q9Y282 383 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 CAB39Q9Y376 341 aaPredicted RBP5.9□□□□□ -1.46
ATG4A-207ENST00000474825 CSAG2Q9Y5P2 127 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 COMMD3-BMI1R4GMX3 469 aa5.9□□□□□ -1.46
ATG4A-207ENST00000474825 FAM208BQ5VWN6 2430 aa5.9□□□□□ -1.47
ATG4A-207ENST00000474825 MGAQ8IWI9 3026 aa5.9□□□□□ -1.47
ATG4A-207ENST00000474825 CEP295Q9C0D2 2601 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms