RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 NHLRC1Q6VVB1 395 aa8.83□□□□□ -1
USP39-214ENST00000474572 SPATC1Q76KD6 591 aa8.83□□□□□ -1
USP39-214ENST00000474572 UBQLNLQ8IYU4 475 aa8.83□□□□□ -1
USP39-214ENST00000474572 DUSP18Q8NEJ0 188 aa8.83□□□□□ -1
USP39-214ENST00000474572 OR2M3Q8NG83 312 aa8.83□□□□□ -1
USP39-214ENST00000474572 OR4M1Q8NGD0 313 aa8.83□□□□□ -1
USP39-214ENST00000474572 OR6N2Q8NGY6 317 aa8.83□□□□□ -1
USP39-214ENST00000474572 TRMT10AQ8TBZ6 339 aaKnown RBP8.83□□□□□ -1
USP39-214ENST00000474572 THAP3Q8WTV1 239 aaPredicted RBP8.83□□□□□ -1
USP39-214ENST00000474572 ASB10Q8WXI3 467 aa8.83□□□□□ -1
USP39-214ENST00000474572 TRIM63Q969Q1 353 aa8.83□□□□□ -1
USP39-214ENST00000474572 SLC25A36Q96CQ1 311 aa8.83□□□□□ -1
USP39-214ENST00000474572 DDIT4LQ96D03 193 aa8.83□□□□□ -1
USP39-214ENST00000474572 AGAP4Q96P64 663 aa8.83□□□□□ -1
USP39-214ENST00000474572 NEDD4LQ96PU5 975 aa8.83□□□□□ -1
USP39-214ENST00000474572 DERL3Q96Q80 235 aa8.83□□□□□ -1
USP39-214ENST00000474572 OR14A2Q96R54 314 aa8.83□□□□□ -1
USP39-214ENST00000474572 GFI1Q99684 422 aa8.83□□□□□ -1
USP39-214ENST00000474572 C11orf54Q9H0W9 315 aaPredicted RBP8.83□□□□□ -1
USP39-214ENST00000474572 CHST11Q9NPF2 352 aa8.83□□□□□ -1
USP39-214ENST00000474572 NOX4Q9NPH5 578 aa8.83□□□□□ -1
USP39-214ENST00000474572 B3GAT2Q9NPZ5 323 aa8.83□□□□□ -1
USP39-214ENST00000474572 MRPL22Q9NWU5 206 aaKnown RBP8.83□□□□□ -1
USP39-214ENST00000474572 ANKRD10Q9NXR5 420 aa8.83□□□□□ -1
USP39-214ENST00000474572 ALKBH4Q9NXW9 302 aa8.83□□□□□ -1
USP39-214ENST00000474572 MED11Q9P086 117 aa8.83□□□□□ -1
USP39-214ENST00000474572 FRRS1LQ9P0K9 344 aa8.83□□□□□ -1
USP39-214ENST00000474572 PPP4R1LQ9P1A2 415 aa8.83□□□□□ -1
USP39-214ENST00000474572 EXTL2Q9UBQ6 330 aa8.83□□□□□ -1
USP39-214ENST00000474572 GPN3Q9UHW5 284 aaPredicted RBP8.83□□□□□ -1
USP39-214ENST00000474572 LAMP5Q9UJQ1 280 aa8.83□□□□□ -1
USP39-214ENST00000474572 SPATA2Q9UM82 520 aa8.83□□□□□ -1
USP39-214ENST00000474572 TECTAO75443 2155 aa8.83□□□□□ -1
USP39-214ENST00000474572 TRIOO75962 3097 aa8.82□□□□□ -1
USP39-214ENST00000474572 TRBV5-7A0A0A0MS05 114 aa8.82□□□□□ -1
USP39-214ENST00000474572 LIPT2A6NK58 231 aa8.82□□□□□ -1
USP39-214ENST00000474572 FAM25AB3EWG3 89 aa8.82□□□□□ -1
USP39-214ENST00000474572 FAM25CB3EWG5 89 aa8.82□□□□□ -1
USP39-214ENST00000474572 FAM25GB3EWG6 89 aa8.82□□□□□ -1
USP39-214ENST00000474572 PDCD5O14737 125 aa8.82□□□□□ -1
USP39-214ENST00000474572 EFNA2O43921 213 aa8.82□□□□□ -1
USP39-214ENST00000474572 GDF9O60383 454 aa8.82□□□□□ -1
USP39-214ENST00000474572 ZNF254O75437 659 aa8.82□□□□□ -1
USP39-214ENST00000474572 ITGA10O75578 1167 aa8.82□□□□□ -1
USP39-214ENST00000474572 OR2J2O76002 312 aa8.82□□□□□ -1
USP39-214ENST00000474572 OR6A2O95222 327 aa8.82□□□□□ -1
USP39-214ENST00000474572 LDOC1O95751 146 aaPredicted RBP8.82□□□□□ -1
USP39-214ENST00000474572 PLGP00747 810 aaPredicted RBP8.82□□□□□ -1
USP39-214ENST00000474572 KLK3P07288 261 aaPredicted RBP8.82□□□□□ -1
USP39-214ENST00000474572 TRAPPC2P0DI81 140 aa8.82□□□□□ -1
USP39-214ENST00000474572 TRAPPC2BP0DI82 140 aa8.82□□□□□ -1
USP39-214ENST00000474572 SLC2A2P11168 524 aaPredicted RBP8.82□□□□□ -1
USP39-214ENST00000474572 MAPK3P27361 379 aaPredicted RBP8.82□□□□□ -1
USP39-214ENST00000474572 CFPP27918 469 aa8.82□□□□□ -1
USP39-214ENST00000474572 ADH6P28332 368 aa8.82□□□□□ -1
USP39-214ENST00000474572 CRABP1P29762 137 aa8.82□□□□□ -1
USP39-214ENST00000474572 NR4A2P43354 598 aa8.82□□□□□ -1
USP39-214ENST00000474572 MAP2K3P46734 347 aa8.82□□□□□ -1
USP39-214ENST00000474572 CCR9P51686 369 aa8.82□□□□□ -1
USP39-214ENST00000474572 CD300CQ08708 224 aa8.82□□□□□ -1
USP39-214ENST00000474572 SELENBP1Q13228 472 aa8.82□□□□□ -1
USP39-214ENST00000474572 IL18Q14116 193 aa8.82□□□□□ -1
USP39-214ENST00000474572 SF3A2Q15428 464 aaKnown RBP8.82□□□□□ -1
USP39-214ENST00000474572 PCK2Q16822 640 aa8.82□□□□□ -1
USP39-214ENST00000474572 Q499Y3 187 aa8.82□□□□□ -1
USP39-214ENST00000474572 TEX30Q5JUR7 227 aa8.82□□□□□ -1
USP39-214ENST00000474572 FAM69BQ5VUD6 431 aa8.82□□□□□ -1
USP39-214ENST00000474572 HACD4Q5VWC8 232 aa8.82□□□□□ -1
USP39-214ENST00000474572 BICRALQ6AI39 1079 aa8.82□□□□□ -1
USP39-214ENST00000474572 PYHIN1Q6K0P9 492 aa8.82□□□□□ -1
USP39-214ENST00000474572 ARSKQ6UWY0 536 aa8.82□□□□□ -1
USP39-214ENST00000474572 H1FNTQ75WM6 255 aaPredicted RBP8.82□□□□□ -1
USP39-214ENST00000474572 DPY19L4Q7Z388 723 aa8.82□□□□□ -1
USP39-214ENST00000474572 DND1Q8IYX4 353 aaKnown RBP8.82□□□□□ -1
USP39-214ENST00000474572 Q8N402 240 aa8.82□□□□□ -1
USP39-214ENST00000474572 OR10G3Q8NGC4 313 aa8.82□□□□□ -1
USP39-214ENST00000474572 OR2Y1Q8NGV0 311 aa8.82□□□□□ -1
USP39-214ENST00000474572 OR2G2Q8NGZ5 317 aa8.82□□□□□ -1
USP39-214ENST00000474572 RNF128Q8TEB7 428 aa8.82□□□□□ -1
USP39-214ENST00000474572 ASB17Q8WXJ9 295 aa8.82□□□□□ -1
USP39-214ENST00000474572 HSD17B8Q92506 261 aa8.82□□□□□ -1
USP39-214ENST00000474572 THRSPQ92748 146 aa8.82□□□□□ -1
USP39-214ENST00000474572 NXPE2Q96DL1 559 aa8.82□□□□□ -1
USP39-214ENST00000474572 ARL5BQ96KC2 179 aa8.82□□□□□ -1
USP39-214ENST00000474572 C4orf45Q96LM5 186 aa8.82□□□□□ -1
USP39-214ENST00000474572 KCNK17Q96T54 332 aa8.82□□□□□ -1
USP39-214ENST00000474572 DEFB126Q9BYW3 111 aa8.82□□□□□ -1
USP39-214ENST00000474572 TSPAN10Q9H1Z9 355 aaPredicted RBP8.82□□□□□ -1
USP39-214ENST00000474572 SH2D2AQ9NP31 389 aa8.82□□□□□ -1
USP39-214ENST00000474572 KLRF1Q9NZS2 232 aa8.82□□□□□ -1
USP39-214ENST00000474572 RABL2AQ9UBK7 228 aaPredicted RBP8.82□□□□□ -1
USP39-214ENST00000474572 PISDQ9UG56 409 aa8.82□□□□□ -1
USP39-214ENST00000474572 RABL2BQ9UNT1 228 aa8.82□□□□□ -1
USP39-214ENST00000474572 PCDHGA9Q9Y5G4 932 aaKnown RBP8.82□□□□□ -1
USP39-214ENST00000474572 HS3ST3B1Q9Y662 390 aa8.82□□□□□ -1
USP39-214ENST00000474572 CHCHD2Q9Y6H1 151 aaPredicted RBP8.82□□□□□ -1
USP39-214ENST00000474572 PRUNE2Q8WUY3 3088 aa8.81□□□□□ -1
USP39-214ENST00000474572 C2orf72A6NCS6 295 aa8.81□□□□□ -1
USP39-214ENST00000474572 TMEM221A6NGB7 291 aa8.81□□□□□ -1
USP39-214ENST00000474572 TMEM212A6NML5 194 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms