RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 RAB34Q9BZG1 259 aa5.5□□□□□ -1.53
SMARCE1-208ENST00000474246 NRSN2Q9GZP1 204 aa5.5□□□□□ -1.53
SMARCE1-208ENST00000474246 SYT4Q9H2B2 425 aa5.5□□□□□ -1.53
SMARCE1-208ENST00000474246 ARMC7Q9H6L4 198 aa5.5□□□□□ -1.53
SMARCE1-208ENST00000474246 MIEF1Q9NQG6 463 aa5.5□□□□□ -1.53
SMARCE1-208ENST00000474246 C2orf42Q9NWW7 574 aa5.5□□□□□ -1.53
SMARCE1-208ENST00000474246 RSL24D1Q9UHA3 163 aaKnown RBP5.5□□□□□ -1.53
SMARCE1-208ENST00000474246 RAB21Q9UL25 225 aa5.5□□□□□ -1.53
SMARCE1-208ENST00000474246 USP22Q9UPT9 525 aa5.5□□□□□ -1.53
SMARCE1-208ENST00000474246 HSPB11Q9Y547 144 aa5.5□□□□□ -1.53
SMARCE1-208ENST00000474246 COL6A6A6NMZ7 2263 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 RELNP78509 3460 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 TBC1D3EA0A087X179 549 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 FAM90A10PA6NDY2 464 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 GGCTO75223 188 aaKnown RBP5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 CYP7B1O75881 506 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 SLC22A5O76082 557 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 PRAMEF1O95521 474 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 ATP1A1P05023 1023 aaKnown RBP5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 LYL1P12980 280 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 PAX1P15863 534 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 FAHP16930 419 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 AKR1C4P17516 323 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 C4BPBP20851 252 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 S100A11P31949 105 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 CDAP32320 146 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 BCL6P41182 706 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 GCLMP48507 274 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 NXPH1P58417 271 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 WDR5P61964 334 aaKnown RBP5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 HHEXQ03014 270 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 UBXN2BQ14CS0 331 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 OXA1LQ15070 435 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 OR8G1Q15617 311 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 SLC22A6Q4U2R8 563 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 SAMD4BQ5PRF9 694 aaKnown RBP5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 TIMM23BQ5SRD1 257 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 FAM71F2Q6NXP2 309 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 FAHD1Q6P587 224 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 C10orf107Q8IVU9 208 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 SKA3Q8IX90 412 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 CADM2Q8N3J6 435 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 SLC5A8Q8N695 610 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 MDGA1Q8NFP4 955 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 OR4Q3Q8NH05 313 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 ZFP28Q8NHY6 868 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 RERGQ96A58 199 aaPredicted RBP5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 NTNG2Q96CW9 530 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 JSRP1Q96MG2 331 aaPredicted RBP5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 AMDHD1Q96NU7 426 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 TLE6Q9H808 572 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 POLE4Q9NR33 117 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 KIAA1456Q9P272 454 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 COPZ2Q9P299 210 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 IMPACTQ9P2X3 320 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 DNMT3BQ9UBC3 853 aaKnown RBP5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 OR12D3Q9UGF7 316 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 BAIAP2Q9UQB8 552 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 TNNQ9UQP3 1299 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 COA3Q9Y2R0 106 aaPredicted RBP5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 ROBO3Q96MS0 1386 aa5.49□□□□□ -1.53
SMARCE1-208ENST00000474246 TBC1D3DA0A087WVF3 549 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 TBC1D3IA0A087WXS9 549 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 A0A1W2PR80 420 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 TBC1D3BA6NDS4 549 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 CENPXA8MT69 81 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 HIDE1A8MVS5 230 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 C2CD4DB7Z1M9 353 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 TBC1D3LB9A6J9 549 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 TP53I11O14683 189 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 NPSP0C0P6 89 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 TBC1D3HP0C7X1 549 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 GABRA1P14867 456 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 ACADLP28330 430 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 S100GP29377 79 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 DDTP30046 118 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 CRYBB2P43320 205 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 TNFRSF4P43489 277 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 ERVPABLB-1P60509 514 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 RPL26P61254 145 aaKnown RBP5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 RPL32P62910 135 aaKnown RBP5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 MLLT11Q13015 90 aaPredicted RBP5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 SYPL1Q16563 259 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 DUSP6Q16828 381 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 MGAT5BQ3V5L5 792 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 EIPR1Q53HC9 387 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 TREML2Q5T2D2 321 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 TBC1D3GQ6DHY5 549 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 TBC1D3CQ6IPX1 549 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 LCLAT1Q6UWP7 414 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 DRAM2Q6UX65 266 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 COX15Q7KZN9 410 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 SLC36A1Q7Z2H8 476 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 NRARPQ7Z6K4 114 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 TMEM25Q86YD3 366 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 TBC1D3Q8IZP1 549 aaPredicted RBP5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 LFNGQ8NES3 379 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 OR10G3Q8NGC4 313 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 OR52N4Q8NGI2 321 aa5.48□□□□□ -1.53
SMARCE1-208ENST00000474246 OR51F2Q8NH61 342 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms