RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 F13BP05160 661 aa15.57■□□□□ 0.08
UPF3A-203ENST00000474056 THRBP10828 461 aa15.57■□□□□ 0.08
UPF3A-203ENST00000474056 ARR3P36575 388 aa15.57■□□□□ 0.08
UPF3A-203ENST00000474056 LSM11P83369 360 aaKnown RBP eCLIP15.57■□□□□ 0.08
UPF3A-203ENST00000474056 ST3GAL3Q11203 375 aa15.57■□□□□ 0.08
UPF3A-203ENST00000474056 CCDC36Q8IYA8 594 aa15.57■□□□□ 0.08
UPF3A-203ENST00000474056 ZNF566Q969W8 418 aa15.57■□□□□ 0.08
UPF3A-203ENST00000474056 CMTM5Q96DZ9 223 aa15.57■□□□□ 0.08
UPF3A-203ENST00000474056 FBXO17Q96EF6 278 aa15.57■□□□□ 0.08
UPF3A-203ENST00000474056 SLC25A44Q96H78 314 aaPredicted RBP15.57■□□□□ 0.08
UPF3A-203ENST00000474056 CA10Q9NS85 328 aa15.57■□□□□ 0.08
UPF3A-203ENST00000474056 B3GNT2Q9NY97 397 aa15.57■□□□□ 0.08
UPF3A-203ENST00000474056 RHCGQ9UBD6 479 aa15.57■□□□□ 0.08
UPF3A-203ENST00000474056 ABCD2Q9UBJ2 740 aa15.57■□□□□ 0.08
UPF3A-203ENST00000474056 MED31Q9Y3C7 131 aa15.57■□□□□ 0.08
UPF3A-203ENST00000474056 HIVEP2P31629 2446 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 IGHV2OR16-5A0A0B4J2B6 119 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 H7C417 338 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 BCL10O95999 233 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 SERPINA1P01009 418 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 IFNW1P05000 195 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 PGA4P0DJD7 388 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 PGA3P0DJD8 388 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 NCK1P16333 377 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 PRDX6P30041 224 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 AQP2P41181 271 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 NUDT6P53370 316 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 PSME3P61289 254 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 GNGT1P63211 74 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 RAB35Q15286 201 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 SWI5Q1ZZU3 235 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 MST1LQ2TV78 715 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 VHLLQ6RSH7 139 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 CPLX4Q7Z7G2 160 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 LIPHQ8WWY8 451 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 HSH2DQ96JZ2 352 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 ZNF75AQ96N20 296 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 KCTD14Q9BQ13 255 aaPredicted RBP15.56■□□□□ 0.08
UPF3A-203ENST00000474056 MAN2C1Q9NTJ4 1040 aa15.56■□□□□ 0.08
UPF3A-203ENST00000474056 TSPAN19P0C672 248 aa15.55■□□□□ 0.08
UPF3A-203ENST00000474056 CD79AP11912 226 aa15.55■□□□□ 0.08
UPF3A-203ENST00000474056 HGFACQ04756 655 aa15.55■□□□□ 0.08
UPF3A-203ENST00000474056 CHRNB3Q05901 458 aa15.55■□□□□ 0.08
UPF3A-203ENST00000474056 RUNX1T1Q06455 604 aa15.55■□□□□ 0.08
UPF3A-203ENST00000474056 PIGFQ07326 219 aa15.55■□□□□ 0.08
UPF3A-203ENST00000474056 ADIPOQQ15848 244 aa15.55■□□□□ 0.08
UPF3A-203ENST00000474056 GSG1Q2KHT4 349 aa15.55■□□□□ 0.08
UPF3A-203ENST00000474056 IFI44LQ53G44 452 aa15.55■□□□□ 0.08
UPF3A-203ENST00000474056 LRFN4Q6PJG9 635 aa15.55■□□□□ 0.08
UPF3A-203ENST00000474056 OFCC1Q8IZS5 231 aa15.55■□□□□ 0.08
UPF3A-203ENST00000474056 RBM15BQ8NDT2 890 aaKnown RBP15.55■□□□□ 0.08
UPF3A-203ENST00000474056 OR4F15Q8NGB8 312 aa15.55■□□□□ 0.08
UPF3A-203ENST00000474056 MOSPD2Q8NHP6 518 aa15.55■□□□□ 0.08
UPF3A-203ENST00000474056 GEMIN6Q8WXD5 167 aaKnown RBP15.55■□□□□ 0.08
UPF3A-203ENST00000474056 ASB10Q8WXI3 467 aa15.55■□□□□ 0.08
UPF3A-203ENST00000474056 MS4A3Q96HJ5 214 aa15.55■□□□□ 0.08
UPF3A-203ENST00000474056 REG4Q9BYZ8 158 aa15.55■□□□□ 0.08
UPF3A-203ENST00000474056 INIPQ9NRY2 104 aa15.55■□□□□ 0.08
UPF3A-203ENST00000474056 ANK3Q12955 4377 aaKnown RBP15.54■□□□□ 0.08
UPF3A-203ENST00000474056 NIPBLQ6KC79 2804 aaeCLIP15.54■□□□□ 0.08
UPF3A-203ENST00000474056 A0A1W2PRG6 482 aa15.54■□□□□ 0.08
UPF3A-203ENST00000474056 GMNCA6NCL1 334 aa15.54■□□□□ 0.08
UPF3A-203ENST00000474056 MCIDASD6RGH6 385 aa15.54■□□□□ 0.08
UPF3A-203ENST00000474056 FFAR1O14842 300 aa15.54■□□□□ 0.08
UPF3A-203ENST00000474056 IGHG1P01857 330 aa15.54■□□□□ 0.08
UPF3A-203ENST00000474056 IFI30P13284 250 aa15.54■□□□□ 0.08
UPF3A-203ENST00000474056 IFNA8P32881 189 aa15.54■□□□□ 0.08
UPF3A-203ENST00000474056 MYBPC1Q00872 1141 aa15.54■□□□□ 0.08
UPF3A-203ENST00000474056 MEX3DQ86XN8 651 aaKnown RBP15.54■□□□□ 0.08
UPF3A-203ENST00000474056 NOXO1Q8NFA2 376 aa15.54■□□□□ 0.08
UPF3A-203ENST00000474056 NUP37Q8NFH4 326 aa15.54■□□□□ 0.08
UPF3A-203ENST00000474056 FGFBP3Q8TAT2 258 aa15.54■□□□□ 0.08
UPF3A-203ENST00000474056 NANOS1Q8WY41 292 aaKnown RBP15.54■□□□□ 0.08
UPF3A-203ENST00000474056 FAM162AQ96A26 154 aa15.54■□□□□ 0.08
UPF3A-203ENST00000474056 ZNF347Q96SE7 839 aa15.54■□□□□ 0.08
UPF3A-203ENST00000474056 FNDC11Q9BVV2 318 aa15.54■□□□□ 0.08
UPF3A-203ENST00000474056 EGFL7Q9UHF1 273 aa15.54■□□□□ 0.08
UPF3A-203ENST00000474056 PMF1-BGLAPU3KQ54 211 aa15.54■□□□□ 0.08
UPF3A-203ENST00000474056 IGHV4-30-2A0A087WSY4 118 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 NDUFAB1O14561 156 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 DHHO43323 396 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 PDE5AO76074 875 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 PRSS23O95084 383 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 QDPRP09417 244 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 PATE4P0C8F1 98 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 ZNF14P17017 642 aaPredicted RBP15.53■□□□□ 0.08
UPF3A-203ENST00000474056 SERPINF1P36955 418 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 GIPRP48546 466 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 PTDSS1P48651 473 aaKnown RBP15.53■□□□□ 0.08
UPF3A-203ENST00000474056 CLRN1P58418 232 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 KRTAP1-1Q07627 177 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 LAPTM4AQ15012 233 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 HIST3H3Q16695 136 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 FKBP9P1Q75LS8 142 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 PIWIL3Q7Z3Z3 882 aaKnown RBP15.53■□□□□ 0.08
UPF3A-203ENST00000474056 SKA3Q8IX90 412 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 ZNF525Q8N782 197 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 MCHR2Q969V1 340 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 BPIFA2Q96DR5 249 aa15.53■□□□□ 0.08
UPF3A-203ENST00000474056 MRPL13Q9BYD1 178 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms