RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 OR12D2P58182 307 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 FXYD6P3P58550 94 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 CTXN1P60606 82 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 ERVK-25P63136 954 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 ZNF85Q03923 595 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 RIPPLY1Q0D2K3 151 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 SKP2Q13309 424 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 ERV3-1Q14264 604 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 NSDHLQ15738 373 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 ZNF74Q16587 644 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 BAK1Q16611 211 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 CDONQ4KMG0 1287 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 TP53I3Q53FA7 332 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 YIF1BQ5BJH7 314 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 ZMAT1Q5H9K5 638 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 FCRLBQ6BAA4 426 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 DMKNQ6E0U4 476 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 DNM1P34Q6PK57 102 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 WDR74Q6RFH5 385 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 SLC16A9Q7RTY1 509 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 RABEPKQ7Z6M1 372 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 C17orf82Q86X59 251 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 RDH10Q8IZV5 341 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 D2HGDHQ8N465 521 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 DEFB119Q8N690 84 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 YIPF7Q8N8F6 280 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 GATSQ8NAP1 163 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 LSM14AQ8ND56 463 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 ZNF248Q8NDW4 579 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 FAM71CQ8NEG0 241 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 C17orf47Q8NEP4 570 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 IL17RDQ8NFM7 739 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 OR4C3Q8NH37 302 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 TRMT10AQ8TBZ6 339 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 LIPHQ8WWY8 451 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 ASB17Q8WXJ9 295 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 ADAMTS14Q8WXS8 1223 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 GHSRQ92847 366 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 PTP4A1Q93096 173 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 CREB3L1Q96BA8 519 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 SMIM19Q96E16 107 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 ZMYND19Q96E35 227 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 ZC3HAV1LQ96H79 300 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 ADAD1Q96M93 576 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 KLHL15Q96M94 604 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 SDHCQ99643 169 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 ORAI3Q9BRQ5 295 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 ALG12Q9BV10 488 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 C11orf54Q9H0W9 315 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 MIXL1Q9H2W2 232 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 PRO3102Q9H379 93 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 LRRN3Q9H3W5 708 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 TCF7L1Q9HCS4 588 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 MMP25Q9NPA2 562 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 NRIP3Q9NQ35 241 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 LANCL2Q9NS86 450 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 QPCTLQ9NXS2 382 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 NCDNQ9UBB6 729 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 MALT1Q9UDY8 824 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 MUTYHQ9UIF7 546 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 LAMP5Q9UJQ1 280 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 RNF215Q9Y6U7 377 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 MDC1Q14676 2089 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 LRP4O75096 1905 aa5.33□□□□□ -1.56
ATPAF1-204ENST00000474020 F5P12259 2224 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 FANCMQ8IYD8 2048 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 IGHV1OR21-1A0A087WYE8 117 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 IGKV3D-11A0A0A0MRZ8 115 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 CCDC163A0A0D9SF12 145 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 TCRBV16S1A1N1A0A5B0 115 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 FAM172BPA6NC97 362 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 A6NIZ1 184 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 CENPBD1B2RD01 187 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 TO15178 435 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 OR2T1O43869 369 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 SLC43A1O75387 559 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 RFPL3O75679 317 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 NCR1O76036 304 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 UBL3O95164 117 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 TXNDC12O95881 172 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 ECDO95905 644 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 LALBAP00709 142 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 HLA-DQA2P01906 255 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 WNT1P04628 370 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 GYPBP06028 91 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 HEXBP07686 556 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 CYC1P08574 325 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 UCHL1P09936 223 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 GSTT2BP0CG30 244 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 APEX1P27695 318 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 SHC1P29353 583 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 TACR3P29371 465 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 AQP2P41181 271 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 OR1D4P47884 311 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 CXCL12P48061 93 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 GABRA4P48169 554 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 CSNK1EP49674 416 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 NR0B1P51843 470 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 PNLIPRP2P54317 469 aa5.32□□□□□ -1.56
ATPAF1-204ENST00000474020 SUMO3P55854 103 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms