RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 OR10G2Q8NGC3 310 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 OR52N5Q8NH56 324 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 GIPC3Q8TF64 312 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 GTPBP3Q969Y2 492 aaKnown RBP10.91□□□□□ -0.66
DDX56-209ENST00000473924 MUS81Q96NY9 551 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 GLTPQ9NZD2 209 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 DNAJB9Q9UBS3 223 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 IL20RAQ9UHF4 553 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 POFUT2Q9Y2G5 429 aa10.91□□□□□ -0.66
DDX56-209ENST00000473924 FLNBO75369 2602 aaKnown RBP10.9□□□□□ -0.66
DDX56-209ENST00000473924 ANKHD1Q8IWZ3 2542 aaKnown RBP10.9□□□□□ -0.66
DDX56-209ENST00000473924 A0A096LPE4 126 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 A0A1W2PPZ6 126 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 A0A1W2PR80 420 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 A6NIZ1 184 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 ZNF99A8MXY4 864 aaPredicted RBP10.9□□□□□ -0.66
DDX56-209ENST00000473924 CENPBD1B2RD01 187 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 XKRYO14609 159 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 TRMUO75648 421 aaKnown RBP10.9□□□□□ -0.66
DDX56-209ENST00000473924 GOSR1O95249 250 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 IGHMP01871 453 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 CD14P08571 375 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 NR2C1P13056 603 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 CRYGSP22914 178 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 SLC6A6P31641 620 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 RPS6KA3P51812 740 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 UBE2NP61088 152 aaKnown RBP10.9□□□□□ -0.66
DDX56-209ENST00000473924 ACTR3P61158 418 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 RAP1BP61224 184 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 RAP1AP62834 184 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 ARF1P84077 181 aaKnown RBP10.9□□□□□ -0.66
DDX56-209ENST00000473924 MYBPC1Q00872 1141 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 RUNX1T1Q06455 604 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 CD47Q08722 323 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 KPNB1Q14974 876 aaKnown RBP10.9□□□□□ -0.66
DDX56-209ENST00000473924 HIKESHIQ53FT3 197 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 ARMC4Q5T2S8 1044 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 ANKRD16Q6P6B7 361 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 SSX8Q7RTT4 187 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 NOXO1Q8NFA2 376 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 OR1K1Q8NGR3 316 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 TMEM54Q969K7 222 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 PIK3IP1Q96FE7 263 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 ZNF570Q96NI8 536 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 TSPAN32Q96QS1 320 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 OR52D1Q9H346 318 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 SLC17A5Q9NRA2 495 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 ARMC1Q9NVT9 282 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 PDP1Q9P0J1 537 aaPredicted RBP10.9□□□□□ -0.66
DDX56-209ENST00000473924 MGAT4BQ9UQ53 548 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 ADAM18Q9Y3Q7 739 aa10.9□□□□□ -0.66
DDX56-209ENST00000473924 ARHGEF9O43307 516 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 CTAG2O75638 210 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 SEC14L2O76054 403 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 WNT11O96014 354 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 QDPRP09417 244 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 FCGR1AP12314 374 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 PRF1P14222 555 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 ZNF26P17031 533 aaPredicted RBP10.89□□□□□ -0.67
DDX56-209ENST00000473924 GSTM3P21266 225 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 FASP25445 335 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 ZNF84P51523 738 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 ZSCAN26Q16670 478 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 RFX4Q33E94 735 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 TBRG1Q3YBR2 411 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 BEX5Q5H9J7 111 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 GPR139Q6DWJ6 353 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 ZNF770Q6IQ21 691 aaPredicted RBP10.89□□□□□ -0.67
DDX56-209ENST00000473924 RPL13AP3Q6NVV1 102 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 THSD4Q6ZMP0 1018 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 DPY19L2P2Q6ZN68 376 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 TMEM179BQ7Z7N9 219 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 C10orf67Q8IYJ2 551 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 ARIH2OSQ8N7S6 290 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 OR52L1Q8NGH7 329 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 ZNF519Q8TB69 540 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 FNDC8Q8TC99 324 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 HDAC2Q92769 488 aaKnown RBP10.89□□□□□ -0.67
DDX56-209ENST00000473924 MCHR2Q969V1 340 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 ZNF837Q96EG3 531 aaPredicted RBP10.89□□□□□ -0.67
DDX56-209ENST00000473924 DUS3LQ96G46 650 aaKnown RBP10.89□□□□□ -0.67
DDX56-209ENST00000473924 SAMD8Q96LT4 415 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 Q96M85 177 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 ERMAPQ96PL5 475 aaPredicted RBP10.89□□□□□ -0.67
DDX56-209ENST00000473924 RBP7Q96R05 134 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 GPX7Q96SL4 187 aaPredicted RBP10.89□□□□□ -0.67
DDX56-209ENST00000473924 FOXB1Q99853 325 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 BDH2Q9BUT1 245 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 IFT27Q9BW83 186 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 MRPL13Q9BYD1 178 aaKnown RBP10.89□□□□□ -0.67
DDX56-209ENST00000473924 ZNF556Q9HAH1 456 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 NRIP3Q9NQ35 241 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 RASSF1Q9NS23 344 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 AMDHD2Q9Y303 409 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 IER3IP1Q9Y5U9 82 aa10.89□□□□□ -0.67
DDX56-209ENST00000473924 TEX13CA0A0J9YWL9 993 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.88□□□□□ -0.67
DDX56-209ENST00000473924 ARRDC5A6NEK1 342 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 SOCS2O14508 198 aa10.88□□□□□ -0.67
DDX56-209ENST00000473924 DHHO43323 396 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms