RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ACTG1P63261 375 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ACTG2P63267 376 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ACTC1P68032 377 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ACTA1P68133 377 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 DGCR2P98153 550 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 VEZF1Q14119 521 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 RAB35Q15286 201 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 CDO1Q16878 200 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 MOGAT2Q3SYC2 334 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 CRY2Q49AN0 593 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 RFTN2Q52LD8 501 aaPredicted RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 PRAMEF8Q5VWM4 474 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 PRAMEF7Q5VXH5 474 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 GLT8D1Q68CQ7 371 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 CD300LGQ6UXG3 332 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 SERPINA13PQ6UXR4 307 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ACOT7LQ6ZUV0 252 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 VTCN1Q7Z7D3 282 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 LMNTD1Q8N9Z9 388 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 TMEM104Q8NE00 496 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 OR52B6Q8NGF0 335 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 GPR150Q8NGU9 434 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 PAQR8Q8TEZ7 354 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ARSGQ96EG1 525 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC35A4Q96G79 324 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 APIPQ96GX9 242 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 PGLYRP2Q96PD5 576 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 DUSP16Q9BY84 665 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 DPH1Q9BZG8 443 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 LPAR2Q9HBW0 351 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 HRASLSQ9HDD0 168 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 DNAJC4Q9NNZ3 241 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 MARCH5Q9NX47 278 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF70Q9UC06 446 aaPredicted RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 IL19Q9UHD0 177 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 TNFSF18Q9UNG2 199 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 FLVCR2Q9UPI3 526 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 PCYT1BQ9Y5K3 369 aaPredicted RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 UBIAD1Q9Y5Z9 338 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 MYO18AQ92614 2054 aaKnown RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 COL4A5P29400 1685 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 GSAPA4D1B5 854 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 DRGXA6NNA5 263 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 M0R129 80 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 SUV39H1O43463 412 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 NDUFB6O95139 128 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 CLDN9O95484 217 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 CD8AP01732 235 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 AMY1AP04745 511 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 APODP05090 189 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 SERPIND1P05546 499 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 OR5AC1P0C628 307 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 GZMBP10144 247 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 TXNP10599 105 aaKnown RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 TPT1P13693 172 aaKnown RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ETFAP13804 333 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 FABP4P15090 132 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 HOXC8P31273 242 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 WNT3AP56704 352 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 OR10A3P58181 314 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 PRPS1P60891 318 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 EFNB1P98172 346 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 TLE1Q04724 770 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ELAVL1Q15717 326 aaKnown RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 FAM174BQ3ZCQ3 159 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 AWAT1Q58HT5 328 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 HECTD2Q5U5R9 776 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 C18orf63Q68DL7 685 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 OR2A2Q6IF42 318 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 TRNP1Q6NT89 227 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC22A25Q6T423 547 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 GDPD4Q6W3E5 623 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 LDB1Q86U70 411 aaPredicted RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 NRSN1Q8IZ57 195 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 FAM24BQ8N5W8 94 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC30A7Q8NEW0 376 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 OR52I1Q8NGK6 324 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 OR2A12Q8NGT7 310 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 OR51Q1Q8NH59 317 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF75AQ96N20 296 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ALKBH3Q96Q83 286 aaPredicted RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 OR5B2Q96R09 309 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 INTS14Q96SY0 518 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 P2RX7Q99572 595 aaKnown RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 NIPSNAP1Q9BPW8 284 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ELOVL4Q9GZR5 314 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 KATNBL1Q9H079 304 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 MTIF3Q9H2K0 278 aaKnown RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 POPDC3Q9HBV1 291 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 FGF20Q9NP95 211 aaPredicted RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ADAP2Q9NPF8 381 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 MEPEQ9NQ76 525 aaPredicted RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 MRPS18AQ9NVS2 196 aaKnown RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 ASIC5Q9NY37 505 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 TFCP2L1Q9NZI6 479 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 KCNE5Q9UJ90 142 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 STYXL1Q9Y6J8 313 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 MIA3Q5JRA6 1907 aa4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 MTCL1Q9Y4B5 1905 aaKnown RBP4.67□□□□□ -1.66
TMEM39A-206ENST00000473684 IGKV6D-41A0A0C4DH26 115 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms