RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 A0A0G2JPF8 293 aa10.7□□□□□ -0.7
TRAF4-209ENST00000473421 HNRNPCL2B2RXH8 293 aa10.7□□□□□ -0.7
TRAF4-209ENST00000473421 HNRNPCL3B7ZW38 293 aa10.7□□□□□ -0.7
TRAF4-209ENST00000473421 HNRNPCL1O60812 293 aaKnown RBP10.7□□□□□ -0.7
TRAF4-209ENST00000473421 KRT75O95678 551 aa10.7□□□□□ -0.7
TRAF4-209ENST00000473421 RAB36O95755 333 aa10.7□□□□□ -0.7
TRAF4-209ENST00000473421 HNRNPCL4P0DMR1 293 aa10.7□□□□□ -0.7
TRAF4-209ENST00000473421 NQO1P15559 274 aaKnown RBP10.7□□□□□ -0.7
TRAF4-209ENST00000473421 ZNF250P15622 560 aa10.7□□□□□ -0.7
TRAF4-209ENST00000473421 EPHA3P29320 983 aa10.7□□□□□ -0.7
TRAF4-209ENST00000473421 ANXA11P50995 505 aaKnown RBP10.7□□□□□ -0.7
TRAF4-209ENST00000473421 FOXL1Q12952 345 aa10.7□□□□□ -0.7
TRAF4-209ENST00000473421 SCGB2A2Q13296 93 aa10.7□□□□□ -0.7
TRAF4-209ENST00000473421 EIF1ADQ8N9N8 165 aaKnown RBP10.7□□□□□ -0.7
TRAF4-209ENST00000473421 DEFB108BQ8NET1 73 aa10.7□□□□□ -0.7
TRAF4-209ENST00000473421 OR6N1Q8NGY5 312 aa10.7□□□□□ -0.7
TRAF4-209ENST00000473421 SLC38A4Q969I6 547 aa10.7□□□□□ -0.7
TRAF4-209ENST00000473421 DDX28Q9NUL7 540 aaKnown RBP10.7□□□□□ -0.7
TRAF4-209ENST00000473421 SLC7A8Q9UHI5 535 aa10.7□□□□□ -0.7
TRAF4-209ENST00000473421 LEF1Q9UJU2 399 aaPredicted RBP10.7□□□□□ -0.7
TRAF4-209ENST00000473421 ZNF232Q9UNY5 417 aa10.7□□□□□ -0.7
TRAF4-209ENST00000473421 C11orf98E9PRG8 122 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 TRAPPC2LH3BP13 241 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 J3QLI3 93 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 PLPP3O14495 311 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 OR2T1O43869 369 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 ANPEPP15144 967 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 PRTN3P24158 256 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 RAD52P43351 418 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 BIDP55957 195 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 KLF3P57682 345 aaPredicted RBP10.69□□□□□ -0.7
TRAF4-209ENST00000473421 TXNL4AP83876 142 aaKnown RBP10.69□□□□□ -0.7
TRAF4-209ENST00000473421 PMS2P3Q13401 168 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 ALG10BQ5I7T1 473 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 REP15Q6BDI9 236 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 TMEM154Q6P9G4 183 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 SLC22A24Q8N4F4 322 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 LSMEM1Q8N8F7 131 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 ADPRHL1Q8NDY3 354 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 SLC30A7Q8NEW0 376 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 OR9I1Q8NGQ6 314 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 SYNPRQ8TBG9 265 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 MGARPQ8TDB4 240 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 TMEM54Q969K7 222 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 CALML5Q9NZT1 146 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.69□□□□□ -0.7
TRAF4-209ENST00000473421 WNK1Q9H4A3 2382 aa10.69□□□□□ -0.7
TRAF4-209ENST00000473421 UBL3O95164 117 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 IGHV1-46P01743 117 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 LCKP06239 509 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 ZCCHC18P0CG32 403 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 OR8G3PP0DMU2 310 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 HOXB9P17482 250 aaPredicted RBP10.68□□□□□ -0.7
TRAF4-209ENST00000473421 MDKP21741 143 aaPredicted RBP10.68□□□□□ -0.7
TRAF4-209ENST00000473421 OMGP23515 440 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 AHCYP23526 432 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 MPV17P39210 176 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 SEC61A1P61619 476 aaKnown RBP10.68□□□□□ -0.7
TRAF4-209ENST00000473421 RPS23P62266 143 aaKnown RBP10.68□□□□□ -0.7
TRAF4-209ENST00000473421 PUDPQ08623 228 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 RBBP4Q09028 425 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 RGNQ15493 299 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 SPATA46Q5T0L3 261 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 DOK3Q7L591 496 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 NET1Q7Z628 596 aaPredicted RBP10.68□□□□□ -0.7
TRAF4-209ENST00000473421 ICA1LQ8NDH6 482 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 CPEB3Q8NE35 698 aaKnown RBP10.68□□□□□ -0.7
TRAF4-209ENST00000473421 CCL17Q92583 94 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 RAB39BQ96DA2 213 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 BCL2L10Q9HD36 194 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 NPHS2Q9NP85 383 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 TMEM38BQ9NVV0 291 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 NKIRAS2Q9NYR9 191 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 UBAP1Q9NZ09 502 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 RPS6KB2Q9UBS0 482 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 PRDM4Q9UKN5 801 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 ZNF346Q9UL40 294 aaKnown RBP10.68□□□□□ -0.7
TRAF4-209ENST00000473421 IFT52Q9Y366 437 aa10.68□□□□□ -0.7
TRAF4-209ENST00000473421 IGHV3OR16-10A0A075B7F0 116 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 ZSCAN5BA6NJL1 495 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 ZNF726A6NNF4 738 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 CLDN25C9JDP6 229 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 SPRY3O43610 288 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 AKAP8O43823 692 aaKnown RBP10.67□□□□□ -0.7
TRAF4-209ENST00000473421 UBOX5O94941 541 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 CSNK1A1P48729 337 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 CDH12P55289 794 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 UCP2P55851 309 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 BST1Q10588 318 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 MELKQ14680 651 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 LEG1Q6P5S2 330 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 MAVSQ7Z434 540 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 PXKQ7Z7A4 578 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 TSPYL5Q86VY4 417 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-209ENST00000473421 MSRB3Q8IXL7 192 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 ZNF101Q8IZC7 436 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 LRRC17Q8N6Y2 441 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 OR4K5Q8NGD3 323 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 GAL3ST1Q99999 423 aa10.67□□□□□ -0.7
TRAF4-209ENST00000473421 PAIP1Q9H074 479 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms