RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 MALT1Q9UDY8 824 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 ENPP5Q9UJA9 477 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 AMDHD2Q9Y303 409 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 CR1P17927 2039 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 TCRBV3S1A0A5B6 114 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 ZNF716A6NP11 495 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 ATP6V1G2-DDX39BF2Z307 99 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 ETV2O00321 342 aaPredicted RBP6.05□□□□□ -1.44
CKS1B-205ENST00000473344 AIM2O14862 343 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 ANKRD28O15084 1053 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 HDAC3O15379 428 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 DNPH1O43598 174 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 ICMTO60725 284 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 STX11O75558 287 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 CCNKO75909 580 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 SNAPC5O75971 98 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 KRT33AO76009 404 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 PMS2P2O95744 297 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 C6orf47O95873 294 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 AK1P00568 194 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 ERCC1P07992 297 aaPredicted RBP6.05□□□□□ -1.44
CKS1B-205ENST00000473344 TFPTP0C1Z6 253 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 LAMP1P11279 417 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 BCKDHAP12694 445 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 MATN1P21941 496 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 RAD23AP54725 363 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 RAB25P57735 213 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 OR2B6P58173 313 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 PRPS1P60891 318 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 ZNF45Q02386 682 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 MVKQ03426 396 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 SKP2Q13309 424 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 CDK10Q15131 360 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 SLC36A3Q495N2 470 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 ZFP69Q49AA0 526 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 EXOSC6Q5RKV6 272 aaKnown RBP6.05□□□□□ -1.44
CKS1B-205ENST00000473344 C12orf54Q6X4T0 127 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 C16orf62Q7Z3J2 963 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 SPATA19Q7Z5L4 167 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 DHFR2Q86XF0 187 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 ELMOD2Q8IZ81 293 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 C1orf162Q8NEQ5 155 aaPredicted RBP6.05□□□□□ -1.44
CKS1B-205ENST00000473344 OR7A2PQ8NGA2 310 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 OR52E4Q8NGH9 312 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 OR5AK3PQ8NH89 298 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 SETD6Q8TBK2 473 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 TWIST2Q8WVJ9 160 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 TMIGD2Q96BF3 282 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 ZNF524Q96C55 264 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 ROPN1LQ96C74 230 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 CENPNQ96H22 339 aaPredicted RBP6.05□□□□□ -1.44
CKS1B-205ENST00000473344 PPP3R2Q96LZ3 170 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 FOXN4Q96NZ1 517 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 SDF2Q99470 211 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 UQCC2Q9BRT2 126 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 CHID1Q9BWS9 393 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 LAT2Q9GZY6 243 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 ARMC7Q9H6L4 198 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 AKIP1Q9NQ31 210 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 ZC4H2Q9NQZ6 224 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 ACER3Q9NUN7 267 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 EXD2Q9NVH0 621 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 GPATCH2Q9NW75 528 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 PAK1IP1Q9NWT1 392 aaPredicted RBP6.05□□□□□ -1.44
CKS1B-205ENST00000473344 SMPD3Q9NY59 655 aaPredicted RBP6.05□□□□□ -1.44
CKS1B-205ENST00000473344 CHRNA9Q9UGM1 479 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 ATP6V1HQ9UI12 483 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 MKLN1Q9UL63 735 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 EMCNQ9ULC0 261 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 MOKQ9UQ07 419 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 SLC9A8Q9Y2E8 581 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 TMA7Q9Y2S6 64 aaKnown RBP6.05□□□□□ -1.44
CKS1B-205ENST00000473344 HDGFL3Q9Y3E1 203 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 RAP2CQ9Y3L5 183 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 DNAJC15Q9Y5T4 150 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 SNX13Q9Y5W8 968 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 KCNE3Q9Y6H6 103 aa6.05□□□□□ -1.44
CKS1B-205ENST00000473344 IGHV4-61A0A0C4DH41 118 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 VSTM5A8MXK1 200 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 VWC2LB2RUY7 222 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 LOC110117498-PIK3R3F6TDL0 507 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 NPIPB9F8W1W9 429 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 ACOT8O14734 319 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 PIP5K1BO14986 540 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 PLIN3O60664 434 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 FCMRO60667 390 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 EIF1BO60739 113 aaKnown RBP6.04□□□□□ -1.44
CKS1B-205ENST00000473344 LYPLA1O75608 230 aaPredicted RBP6.04□□□□□ -1.44
CKS1B-205ENST00000473344 UGT2B17O75795 530 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 AGR2O95994 175 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 HPRP00739 348 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 CRYAAP02489 173 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 ITGA5P08648 1049 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 TCN1P20061 433 aaPredicted RBP6.04□□□□□ -1.44
CKS1B-205ENST00000473344 EEF1B2P24534 225 aaKnown RBP6.04□□□□□ -1.44
CKS1B-205ENST00000473344 RYKP34925 604 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 SERPINF1P36955 418 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 CLK1P49759 484 aaKnown RBP6.04□□□□□ -1.44
CKS1B-205ENST00000473344 ATP4BP51164 291 aa6.04□□□□□ -1.44
CKS1B-205ENST00000473344 SLC16A1P53985 500 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms