RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 TNFRSF11BO00300 401 aa13.39□□□□□ -0.27
SDC3-203ENST00000471567 OR10H3O60404 316 aa13.39□□□□□ -0.27
SDC3-203ENST00000471567 ACADSP16219 412 aa13.39□□□□□ -0.27
SDC3-203ENST00000471567 CTXN1P60606 82 aa13.39□□□□□ -0.27
SDC3-203ENST00000471567 RPL27P61353 136 aaKnown RBP13.39□□□□□ -0.27
SDC3-203ENST00000471567 GK3PQ14409 553 aa13.39□□□□□ -0.27
SDC3-203ENST00000471567 HIST3H3Q16695 136 aa13.39□□□□□ -0.27
SDC3-203ENST00000471567 FAM205BPQ63HN1 556 aa13.39□□□□□ -0.27
SDC3-203ENST00000471567 OR2T5Q6IEZ7 315 aa13.39□□□□□ -0.27
SDC3-203ENST00000471567 KLHL17Q6TDP4 642 aa13.39□□□□□ -0.27
SDC3-203ENST00000471567 ZER1Q7Z7L7 766 aa13.39□□□□□ -0.27
SDC3-203ENST00000471567 CCDC36Q8IYA8 594 aa13.39□□□□□ -0.27
SDC3-203ENST00000471567 OR2T29Q8NH02 315 aa13.39□□□□□ -0.27
SDC3-203ENST00000471567 CANT1Q8WVQ1 401 aa13.39□□□□□ -0.27
SDC3-203ENST00000471567 ZNF837Q96EG3 531 aaPredicted RBP13.39□□□□□ -0.27
SDC3-203ENST00000471567 HS3ST6Q96QI5 342 aa13.39□□□□□ -0.27
SDC3-203ENST00000471567 CHID1Q9BWS9 393 aa13.39□□□□□ -0.27
SDC3-203ENST00000471567 MOV10Q9HCE1 1003 aaKnown RBP13.39□□□□□ -0.27
SDC3-203ENST00000471567 POFUT2Q9Y2G5 429 aa13.39□□□□□ -0.27
SDC3-203ENST00000471567 SPG11Q96JI7 2443 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 A0A1W2PPR1 153 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 A0A1W2PR80 420 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 TCRBV3S1A0A5B6 114 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 DPRXA6NFQ7 191 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 UNC119BA6NIH7 251 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 TRMUO75648 421 aaKnown RBP13.38□□□□□ -0.27
SDC3-203ENST00000471567 NDUFB2O95178 105 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 CD3EP07766 207 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 CD14P08571 375 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 NR2C1P13056 603 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 FPR3P25089 353 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 RPL4P36578 427 aaKnown RBP13.38□□□□□ -0.27
SDC3-203ENST00000471567 CLRN1P58418 232 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 UBE2NP61088 152 aaKnown RBP13.38□□□□□ -0.27
SDC3-203ENST00000471567 HIKESHIQ53FT3 197 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 C1orf94Q6P1W5 598 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 LRFN4Q6PJG9 635 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 TMEM108Q6UXF1 575 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 CCDC121Q6ZUS5 278 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 SPATA24Q86W54 205 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 NOXO1Q8NFA2 376 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 OR4C15Q8NGM1 316 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 FNDC8Q8TC99 324 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 GNPDA2Q8TDQ7 276 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 RSRC1Q96IZ7 334 aaKnown RBP13.38□□□□□ -0.27
SDC3-203ENST00000471567 ALG12Q9BV10 488 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 NELFAQ9H3P2 528 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 YY1AP1Q9H869 796 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 REEP1Q9H902 201 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 NPAP1Q9NZP6 1156 aa13.38□□□□□ -0.27
SDC3-203ENST00000471567 ZNF346Q9UL40 294 aaKnown RBP13.38□□□□□ -0.27
SDC3-203ENST00000471567 A6NIZ1 184 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 EBAG9O00559 213 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 DHHO43323 396 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 ENTPD5O75356 428 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 QDPRP09417 244 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 ZNF26P17031 533 aaPredicted RBP13.37□□□□□ -0.27
SDC3-203ENST00000471567 PTAFRP25105 342 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 GSSP48637 474 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 ZNF133P52736 654 aaPredicted RBP13.37□□□□□ -0.27
SDC3-203ENST00000471567 RAP1BP61224 184 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 RAP1AP62834 184 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 RUNX1T1Q06455 604 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 ADAM5Q6NVV9 412 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 ZNF704Q6ZNC4 412 aaPredicted RBP13.37□□□□□ -0.27
SDC3-203ENST00000471567 CDH24Q86UP0 819 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 IGFN1Q86VF2 1251 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 FAM169BQ8N8A8 192 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 PAPD5Q8NDF8 572 aaKnown RBP13.37□□□□□ -0.27
SDC3-203ENST00000471567 NINJ1Q92982 152 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 MCHR2Q969V1 340 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 GPX7Q96SL4 187 aaPredicted RBP13.37□□□□□ -0.27
SDC3-203ENST00000471567 KCNK17Q96T54 332 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 GPA33Q99795 319 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 FOXB1Q99853 325 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 KATNB1Q9BVA0 655 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 MGAT4BQ9UQ53 548 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 RNF115Q9Y4L5 304 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 MAST4O15021 2626 aa13.37□□□□□ -0.27
SDC3-203ENST00000471567 A0A096LPE4 126 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 A0A1W2PPZ6 126 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 AHCYL1O43865 530 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 MGRN1O60291 552 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 CCNB2O95067 398 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 CST1P01037 141 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 ACVR1BP36896 505 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 ZNF83P51522 516 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 ERVK-25P63136 954 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 CBX1P83916 185 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 BSPH1Q075Z2 132 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 TSPAN31Q12999 210 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 TOP3AQ13472 1001 aaPredicted RBP13.36□□□□□ -0.27
SDC3-203ENST00000471567 C3orf36Q3SXR2 165 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 GPR139Q6DWJ6 353 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 PGBD2Q6P3X8 592 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 SMARCD3Q6STE5 483 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 ZNF813Q6ZN06 617 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 DPY19L2P2Q6ZN68 376 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 ASRGL1Q7L266 308 aa13.36□□□□□ -0.27
SDC3-203ENST00000471567 ARIH2OSQ8N7S6 290 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms