RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 LINC00173Q6ZV60 143 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 TMEM179Q6ZVK1 233 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 ELMOD2Q8IZ81 293 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 OR2L13Q8N349 312 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 ST20-AS1Q8NBB2 130 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 OR5D13Q8NGL4 314 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 RIT2Q99578 217 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 SLC25A2Q9BXI2 301 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 TMEM117Q9H0C3 514 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 FAM49BQ9NUQ9 324 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 SPASTQ9UBP0 616 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 MMP17Q9ULZ9 603 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 N6AMT1Q9Y5N5 214 aa0.68□□□□□ -2.3
COMMD3-209ENST00000471350 NCAPD2Q15021 1401 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 A0A0B4J2A0 478 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 A0A1W2PNN7 141 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 RGS16O15492 202 aaPredicted RBP0.67□□□□□ -2.3
COMMD3-209ENST00000471350 UPK3AO75631 287 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 YIF1AO95070 293 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 TGFAP01135 160 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 IGHG4P01861 327 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 ARF4P18085 180 aaPredicted RBP0.67□□□□□ -2.3
COMMD3-209ENST00000471350 HTR2AP28223 471 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 GDI2P50395 445 aaKnown RBP0.67□□□□□ -2.3
COMMD3-209ENST00000471350 GZMMP51124 257 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 SUB1P53999 127 aaKnown RBP eCLIP0.67□□□□□ -2.3
COMMD3-209ENST00000471350 ADARB1P78563 741 aaKnown RBP0.67□□□□□ -2.3
COMMD3-209ENST00000471350 VGLL4Q14135 290 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 SAXO2Q658L1 398 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 NCCRP1Q6ZVX7 275 aaPredicted RBP0.67□□□□□ -2.3
COMMD3-209ENST00000471350 USP50Q70EL3 339 aaPredicted RBP0.67□□□□□ -2.3
COMMD3-209ENST00000471350 MSANTD4Q8NCY6 345 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 Q8NDZ9 215 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 CATSPER1Q8NEC5 780 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 NOXO1Q8NFA2 376 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 OR4S2Q8NH73 311 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 LKAAEAR1Q8TD35 194 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 UFD1Q92890 307 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 SGK3Q96BR1 496 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 CLCC1Q96S66 551 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 RNF2Q99496 336 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 SH3GL3Q99963 347 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 SHANK2-AS3Q9BTD1 123 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 EDEM2Q9BV94 578 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 DPH5Q9H2P9 285 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 SIGLEC8Q9NYZ4 499 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 IL36GQ9NZH8 169 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 DHCR7Q9UBM7 475 aaKnown RBP0.67□□□□□ -2.3
COMMD3-209ENST00000471350 SHPKQ9UHJ6 478 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 ZNF639Q9UID6 485 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 PIKFYVEQ9Y2I7 2098 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 WDR62O43379 1518 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 CEMIPQ8WUJ3 1361 aa0.67□□□□□ -2.3
COMMD3-209ENST00000471350 SHANK1Q9Y566 2161 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 ADAMTS13Q76LX8 1427 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 IGHV3OR16-8A0A075B7F1 116 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 CENPVL3A0A0U1RRI6 287 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 A0A1B0GVI7 797 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 TCRBV9S1A1TA0A576 114 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 BPY2O14599 106 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 POLR1CO15160 346 aaPredicted RBP0.66□□□□□ -2.3
COMMD3-209ENST00000471350 SOCS1O15524 211 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 RP2O75695 350 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 RAB3DO95716 219 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 MBD3O95983 291 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 CAPN1P07384 714 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 GNAO1P09471 354 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 UBTFL6P0CB48 400 aaPredicted RBP0.66□□□□□ -2.3
COMMD3-209ENST00000471350 HSMCR30P0CW71 290 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 DTYMKP23919 212 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 DNAJB1P25685 340 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 TGFBR2P37173 567 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 CDKN2BP42772 138 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 GPR6P46095 362 aaPredicted RBP0.66□□□□□ -2.3
COMMD3-209ENST00000471350 UGT2B15P54855 530 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 FUT5Q11128 374 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 TATDN3Q17R31 274 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 KRTAP21-3Q3LHN1 58 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 CARD16Q5EG05 197 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 OR2A2Q6IF42 318 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 KCNIP4Q6PIL6 250 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 BLOC1S2Q6QNY1 142 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 HDDC2Q7Z4H3 204 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 VSTM4Q8IW00 320 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 STPG2Q8N412 459 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 TMEM105Q8N8V8 129 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 GMCL1P1Q8NEA9 526 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 PYROXD1Q8WU10 500 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 C15orf40Q8WUR7 153 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 SPRYD4Q8WW59 207 aaPredicted RBP0.66□□□□□ -2.3
COMMD3-209ENST00000471350 SLC25A46Q96AG3 418 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 NEURL3Q96EH8 262 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 SAMD8Q96LT4 415 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 ZNF317Q96PQ6 595 aaPredicted RBP0.66□□□□□ -2.3
COMMD3-209ENST00000471350 ANGPTL4Q9BY76 406 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 MRPL13Q9BYD1 178 aaKnown RBP0.66□□□□□ -2.3
COMMD3-209ENST00000471350 MRPL37Q9BZE1 423 aaKnown RBP0.66□□□□□ -2.3
COMMD3-209ENST00000471350 C1orf198Q9H425 327 aa0.66□□□□□ -2.3
COMMD3-209ENST00000471350 UBE2ZQ9H832 354 aaPredicted RBP0.66□□□□□ -2.3
COMMD3-209ENST00000471350 NEK6Q9HC98 313 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms