RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 FKBP14Q9NWM8 211 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 ASB6Q9NWX5 421 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 TVP23BQ9NYZ1 205 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 ZNF224Q9NZL3 707 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 PRSS50Q9UI38 385 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 RCE1Q9Y256 329 aa8.73□□□□□ -1.01
SF3A1-207ENST00000471342 PRSS37A4D1T9 235 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 CLEC18AA5D8T8 446 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 ZNF503-AS2A6NEH8 195 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 RPL36A-HNRNPH2H7BZ11 118 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 ENTPD6O75354 484 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 IL18BPO95998 194 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 TFP02787 698 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 TPOP07202 933 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 YES1P07947 543 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 ITGA5P08648 1049 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 HTR1AP08908 422 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 GABRA1P14867 456 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 GNLYP22749 145 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 ANOS1P23352 680 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 AHCYP23526 432 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 PTGER4P35408 488 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 SLC25A1P53007 311 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 RAD23AP54725 363 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.72□□□□□ -1.01
SF3A1-207ENST00000471342 KRR1Q13601 381 aaKnown RBP8.72□□□□□ -1.01
SF3A1-207ENST00000471342 OCLNQ16625 522 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 PCK2Q16822 640 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 RIPPLY2Q5TAB7 128 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 OTPQ5XKR4 325 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 GPR139Q6DWJ6 353 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 TMEM225Q6GV28 225 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 RPL13AP3Q6NVV1 102 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 SEZ6L2Q6UXD5 910 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 CLEC18BQ6UXF7 455 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 FAM214BQ7L5A3 538 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 ZNF627Q7L945 461 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 CPOQ8IVL8 374 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 UEVLDQ8IX04 471 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 GCNT2Q8N0V5 402 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 GABRG1Q8N1C3 465 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 TCEANCQ8N8B7 351 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 CLEC18CQ8NCF0 446 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 GALNT11Q8NCW6 608 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 SDR9C7Q8NEX9 313 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 FGFBP3Q8TAT2 258 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 CNIH3Q8TBE1 160 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 TMEM163Q8TC26 289 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 CYGBQ8WWM9 190 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 MCHR2Q969V1 340 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 DTNBP1Q96EV8 351 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 GMPPAQ96IJ6 420 aaPredicted RBP8.72□□□□□ -1.01
SF3A1-207ENST00000471342 LRR1Q96L50 414 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 ZNF75AQ96N20 296 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 ZNF582Q96NG8 517 aaPredicted RBP8.72□□□□□ -1.01
SF3A1-207ENST00000471342 TACO1Q9BSH4 297 aaKnown RBP8.72□□□□□ -1.01
SF3A1-207ENST00000471342 NAA11Q9BSU3 229 aaPredicted RBP8.72□□□□□ -1.01
SF3A1-207ENST00000471342 IFT27Q9BW83 186 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 LINC00470Q9BZP3 86 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 NUAK2Q9H093 628 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 EXO5Q9H790 373 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 ZNF556Q9HAH1 456 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 TBC1D23Q9NUY8 699 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 MRPL22Q9NWU5 206 aaKnown RBP8.72□□□□□ -1.01
SF3A1-207ENST00000471342 RAB26Q9ULW5 256 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 BAIAP2Q9UQB8 552 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 MED12LQ86YW9 2145 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 ADGRG4Q8IZF6 3080 aa8.72□□□□□ -1.01
SF3A1-207ENST00000471342 WIPF3A6NGB9 483 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 CENPBD1B2RD01 187 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 E9PLN8 166 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 H3BN98 237 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 RNF13O43567 381 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 TLX2O43763 284 aaPredicted RBP8.71□□□□□ -1.02
SF3A1-207ENST00000471342 MPZL1O95297 269 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 BCL10O95999 233 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 WNT11O96014 354 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 HOXD4P09016 255 aaPredicted RBP8.71□□□□□ -1.02
SF3A1-207ENST00000471342 ACVR1BP36896 505 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 OR3A2P47893 321 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 SMSP52788 366 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 RPS3AP61247 264 aaKnown RBP8.71□□□□□ -1.02
SF3A1-207ENST00000471342 TOP3AQ13472 1001 aaPredicted RBP8.71□□□□□ -1.02
SF3A1-207ENST00000471342 IL18R1Q13478 541 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 CAMK2DQ13557 499 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 RNPS1Q15287 305 aaKnown RBP8.71□□□□□ -1.02
SF3A1-207ENST00000471342 TAF11Q15544 211 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 RSPO1Q2MKA7 263 aaPredicted RBP8.71□□□□□ -1.02
SF3A1-207ENST00000471342 C10orf128Q5T292 105 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 PDSS1Q5T2R2 415 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 TTC23Q5W5X9 447 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 GPAT4Q86UL3 456 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 TIGD4Q8IY51 512 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 NOXO1Q8NFA2 376 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 TRUB1Q8WWH5 349 aaKnown RBP8.71□□□□□ -1.02
SF3A1-207ENST00000471342 HTRA1Q92743 480 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 INTS12Q96CB8 462 aaKnown RBP8.71□□□□□ -1.02
SF3A1-207ENST00000471342 IL4I1Q96RQ9 567 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 VKORC1Q9BQB6 163 aa8.71□□□□□ -1.02
SF3A1-207ENST00000471342 SYT4Q9H2B2 425 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms