RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 NPPAP01160 153 aa14.07□□□□□ -0.16
COL9A3-208ENST00000469802 PGA4P0DJD7 388 aa14.07□□□□□ -0.16
COL9A3-208ENST00000469802 PGA3P0DJD8 388 aa14.07□□□□□ -0.16
COL9A3-208ENST00000469802 CD79AP11912 226 aa14.07□□□□□ -0.16
COL9A3-208ENST00000469802 GIFP27352 417 aa14.07□□□□□ -0.16
COL9A3-208ENST00000469802 KLF10Q13118 480 aa14.07□□□□□ -0.16
COL9A3-208ENST00000469802 GGTLC2Q14390 218 aa14.07□□□□□ -0.16
COL9A3-208ENST00000469802 REP15Q6BDI9 236 aa14.07□□□□□ -0.16
COL9A3-208ENST00000469802 KRT80Q6KB66 452 aa14.07□□□□□ -0.16
COL9A3-208ENST00000469802 PIWIL3Q7Z3Z3 882 aaKnown RBP14.07□□□□□ -0.16
COL9A3-208ENST00000469802 SPATA21Q7Z572 469 aa14.07□□□□□ -0.16
COL9A3-208ENST00000469802 CDK20Q8IZL9 346 aa14.07□□□□□ -0.16
COL9A3-208ENST00000469802 FOXN4Q96NZ1 517 aa14.07□□□□□ -0.16
COL9A3-208ENST00000469802 SH3GL1Q99961 368 aa14.07□□□□□ -0.16
COL9A3-208ENST00000469802 RAB1BQ9H0U4 201 aa14.07□□□□□ -0.16
COL9A3-208ENST00000469802 SAR1AQ9NR31 198 aa14.07□□□□□ -0.16
COL9A3-208ENST00000469802 FGFR1OP2Q9NVK5 253 aa14.07□□□□□ -0.16
COL9A3-208ENST00000469802 GLTPQ9NZD2 209 aa14.07□□□□□ -0.16
COL9A3-208ENST00000469802 CDC42EP3Q9UKI2 254 aa14.07□□□□□ -0.16
COL9A3-208ENST00000469802 MRASO14807 208 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 UBL3O95164 117 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 OR6A2O95222 327 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 IGF2P01344 180 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 FAM157CP0CG43 387 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 TROVE2P10155 538 aaKnown RBP eCLIP14.06□□□□□ -0.16
COL9A3-208ENST00000469802 GIPRP48546 466 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 PTDSS1P48651 473 aaKnown RBP14.06□□□□□ -0.16
COL9A3-208ENST00000469802 GZMKP49863 264 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 PIGFQ07326 219 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 MELKQ14680 651 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 FXNQ16595 210 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 ERICH5Q6P6B1 374 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 PODNL1Q6PEZ8 512 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 LRFN4Q6PJG9 635 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 NANOGNBQ7Z5D8 188 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 CARM1Q86X55 608 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 ZNF584Q8IVC4 421 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 SPATA3Q8NHX4 192 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 NEU4Q8WWR8 484 aaPredicted RBP14.06□□□□□ -0.16
COL9A3-208ENST00000469802 ZNF566Q969W8 418 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 MRPL24Q96A35 216 aaKnown RBP14.06□□□□□ -0.16
COL9A3-208ENST00000469802 SLC25A44Q96H78 314 aaPredicted RBP14.06□□□□□ -0.16
COL9A3-208ENST00000469802 ZNF583Q96ND8 569 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 SEPHS2Q99611 448 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 BPESC1Q9GZL8 116 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 POLR2J2Q9GZM3 115 aaKnown RBP14.06□□□□□ -0.16
COL9A3-208ENST00000469802 POLR2J3Q9H1A7 115 aaKnown RBP14.06□□□□□ -0.16
COL9A3-208ENST00000469802 TMEM38BQ9NVV0 291 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 FBXL3Q9UKT7 428 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 BAG5Q9UL15 447 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 SH3GLB1Q9Y371 365 aa14.06□□□□□ -0.16
COL9A3-208ENST00000469802 STAB1Q9NY15 2570 aa14.05□□□□□ -0.16
COL9A3-208ENST00000469802 VSTM5A8MXK1 200 aa14.05□□□□□ -0.16
COL9A3-208ENST00000469802 RNF13O43567 381 aa14.05□□□□□ -0.16
COL9A3-208ENST00000469802 RAB36O95755 333 aa14.05□□□□□ -0.16
COL9A3-208ENST00000469802 MT-ND1P03886 318 aa14.05□□□□□ -0.16
COL9A3-208ENST00000469802 TSPAN19P0C672 248 aa14.05□□□□□ -0.16
COL9A3-208ENST00000469802 TNFRSF1BP20333 461 aa14.05□□□□□ -0.16
COL9A3-208ENST00000469802 GLRXP35754 106 aa14.05□□□□□ -0.16
COL9A3-208ENST00000469802 RBM34P42696 430 aaKnown RBP14.05□□□□□ -0.16
COL9A3-208ENST00000469802 EVX1P49640 407 aa14.05□□□□□ -0.16
COL9A3-208ENST00000469802 UGT2B15P54855 530 aa14.05□□□□□ -0.16
COL9A3-208ENST00000469802 RAB1AP62820 205 aa14.05□□□□□ -0.16
COL9A3-208ENST00000469802 HIST3H3Q16695 136 aa14.05□□□□□ -0.16
COL9A3-208ENST00000469802 SKA3Q8IX90 412 aa14.05□□□□□ -0.16
COL9A3-208ENST00000469802 ZCCHC24Q8N2G6 241 aaKnown RBP14.05□□□□□ -0.16
COL9A3-208ENST00000469802 SLC22A24Q8N4F4 322 aa14.05□□□□□ -0.16
COL9A3-208ENST00000469802 FGFBP3Q8TAT2 258 aa14.05□□□□□ -0.16
COL9A3-208ENST00000469802 KCNK17Q96T54 332 aa14.05□□□□□ -0.16
COL9A3-208ENST00000469802 ECSITQ9BQ95 431 aa14.05□□□□□ -0.16
COL9A3-208ENST00000469802 MRPL37Q9BZE1 423 aaKnown RBP14.05□□□□□ -0.16
COL9A3-208ENST00000469802 CMAHPQ9Y471 501 aa14.05□□□□□ -0.16
COL9A3-208ENST00000469802 FAM220BPB1ANY3 271 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 OR5F1O95221 314 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 STAMBPO95630 424 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 IFNA2P01563 188 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 DAOP14920 347 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 ZNF23P17027 643 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 IGFBP5P24593 272 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 ARFIP2P53365 341 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 RPL18Q07020 188 aaKnown RBP14.04□□□□□ -0.16
COL9A3-208ENST00000469802 MAPRE2Q15555 327 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 CARTPTQ16568 116 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 NRN1LQ496H8 165 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 NKAIN4Q8IVV8 208 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 ZNF786Q8N393 782 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 ZNF540Q8NDQ6 660 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 PFN4Q8NHR9 129 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 TMEM255BQ8WV15 326 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 C10orf82Q8WW14 230 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 LIPHQ8WWY8 451 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 MSI2Q96DH6 328 aaKnown RBP14.04□□□□□ -0.16
COL9A3-208ENST00000469802 MRPL13Q9BYD1 178 aaKnown RBP14.04□□□□□ -0.16
COL9A3-208ENST00000469802 DYNLRB1Q9NP97 96 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 C20orf141Q9NUB4 165 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 LPAR3Q9UBY5 353 aa14.04□□□□□ -0.16
COL9A3-208ENST00000469802 FBN3Q75N90 2809 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 CENPBD1B2RD01 187 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 DHHO43323 396 aa14.03□□□□□ -0.16
COL9A3-208ENST00000469802 LMX1BO60663 402 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms