RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 ING1Q9UK53 422 aaPredicted RBP11.36□□□□□ -0.59
TRAF4-208ENST00000469529 MCTS1Q9ULC4 181 aaKnown RBP11.36□□□□□ -0.59
TRAF4-208ENST00000469529 NPIPA1Q9UND3 350 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 RCE1Q9Y256 329 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 LIPGQ9Y5X9 500 aa11.36□□□□□ -0.59
TRAF4-208ENST00000469529 CCDC182A6NF36 153 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 B8ZZF3 427 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 PTGES3LE9PB15 166 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 RGS10O43665 173 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 RAMP1O60894 148 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 TRMUO75648 421 aaKnown RBP11.35□□□□□ -0.59
TRAF4-208ENST00000469529 GLCEO94923 617 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 FADS2O95864 444 aaKnown RBP11.35□□□□□ -0.59
TRAF4-208ENST00000469529 TFAP2AP05549 437 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 HOXD4P09016 255 aaPredicted RBP11.35□□□□□ -0.59
TRAF4-208ENST00000469529 PLA2G2AP14555 144 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 SPI1P17947 270 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 CDH11P55287 796 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 MVKQ03426 396 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 ST3GAL4Q11206 333 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 RNPS1Q15287 305 aaKnown RBP11.35□□□□□ -0.59
TRAF4-208ENST00000469529 LINC01590Q5TEZ4 76 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 LEG1Q6P5S2 330 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 B3GNT6Q6ZMB0 384 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 FCRLAQ7L513 359 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 BCDIN3DQ7Z5W3 292 aaKnown RBP11.35□□□□□ -0.59
TRAF4-208ENST00000469529 SPARTQ8N0X7 666 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 Q8NA96 180 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 SDR9C7Q8NEX9 313 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 RNF128Q8TEB7 428 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 KISS1RQ969F8 398 aaPredicted RBP11.35□□□□□ -0.59
TRAF4-208ENST00000469529 RASD2Q96D21 266 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 LGALS12Q96DT0 336 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 TMEM80Q96HE8 168 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 TXNDC15Q96J42 360 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 RBP7Q96R05 134 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 RACGAP1Q9H0H5 632 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 AMBNQ9NP70 447 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 GLRX2Q9NS18 164 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 DIMT1Q9UNQ2 313 aaKnown RBP11.35□□□□□ -0.59
TRAF4-208ENST00000469529 B9D1Q9UPM9 204 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 KALRNO60229 2985 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 BAHCC1Q9P281 2608 aa11.35□□□□□ -0.59
TRAF4-208ENST00000469529 SLC35F4A4IF30 521 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 FAM183AA6NL82 134 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 ZNF726A6NNF4 738 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 NPIPA2E9PIF3 369 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 NPIPA3F8WFD2 350 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 ARHGEF9O43307 516 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 AKAP8O43823 692 aaKnown RBP11.34□□□□□ -0.59
TRAF4-208ENST00000469529 SYNGR4O95473 234 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 CLPTM1O96005 669 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 IGHG1P01857 330 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 PGA4P0DJD7 388 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 PGA3P0DJD8 388 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 PTGS2P35354 604 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 PTGER4P35408 488 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 RPL5P46777 297 aaKnown RBP11.34□□□□□ -0.59
TRAF4-208ENST00000469529 NR1H2P55055 460 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 MLLT10P55197 1068 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 NFATC3Q12968 1075 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 STK11Q15831 433 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 NADK2Q4G0N4 442 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 LCN1P1Q5VSP4 162 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 TMEM154Q6P9G4 183 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 FAM180AQ6UWF9 173 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 UBQLNLQ8IYU4 475 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 OR6V1Q8N148 313 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 GHDCQ8N2G8 530 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 POMGNT2Q8NAT1 580 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 CYB561A3Q8NBI2 242 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 BBS1Q8NFJ9 593 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 FAR1Q8WVX9 515 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 TMEM54Q969K7 222 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 RNFT2Q96EX2 444 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 DNAJA3Q96EY1 480 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 ZNF845Q96IR2 970 aaPredicted RBP11.34□□□□□ -0.59
TRAF4-208ENST00000469529 MNTQ99583 582 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 EXO5Q9H790 373 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 CALHM2Q9HA72 323 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 BATF3Q9NR55 127 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 INPP5EQ9NRR6 644 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 PARPBPQ9NWS1 579 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 ASB6Q9NWX5 421 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 KLHL9Q9P2J3 617 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 ERVK-18Q9QC07 812 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 FLVCR1Q9Y5Y0 555 aa11.34□□□□□ -0.59
TRAF4-208ENST00000469529 PIEZO2Q9H5I5 2752 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 IGLV1-36A0A0B4J1U3 117 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 OR6C65A6NJZ3 312 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 SMNDC1O75940 238 aaKnown RBP eCLIP11.33□□□□□ -0.61e-7■■■□□ 18.1
TRAF4-208ENST00000469529 WISP2O76076 250 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 IGHA1P01876 353 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 HRGP04196 525 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 SBK2P0C263 348 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 FCGR2AP12318 317 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 KLK2P20151 261 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 PCMT1P22061 227 aa11.33□□□□□ -0.6
TRAF4-208ENST00000469529 EEF1B2P24534 225 aaKnown RBP11.33□□□□□ -0.6
TRAF4-208ENST00000469529 ALDH3B2P48448 385 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms