RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 KLHL13Q9P2N7 655 aa6.86□□□□□ -1.31
COL6A3-208ENST00000468792 GNG8Q9UK08 70 aa6.86□□□□□ -1.31
COL6A3-208ENST00000468792 RPH3AQ9Y2J0 694 aaPredicted RBP6.86□□□□□ -1.31
COL6A3-208ENST00000468792 HDGFL3Q9Y3E1 203 aa6.86□□□□□ -1.31
COL6A3-208ENST00000468792 HS3ST3B1Q9Y662 390 aa6.86□□□□□ -1.31
COL6A3-208ENST00000468792 CHCHD2Q9Y6H1 151 aaPredicted RBP6.86□□□□□ -1.31
COL6A3-208ENST00000468792 DMDP11532 3685 aa6.86□□□□□ -1.31
COL6A3-208ENST00000468792 hCG_2014768A0A024R1R8 64 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 TRBV5-5A0A0J9YX44 114 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 TMEM212A6NML5 194 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 TTLL8A6PVC2 850 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 POM121CA8CG34 1229 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 B4DXG7 233 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 DCTN6O00399 190 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 PDCD5O14737 125 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 LRRTM2O43300 516 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 ARHGEF9O43307 516 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 ZNF254O75437 659 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 ITGA10O75578 1167 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 AQP8O94778 261 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 DLGAP3O95886 979 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 CSF3P09919 207 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 CCL4P13236 92 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 RAB3BP20337 219 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 EDNRAP25101 427 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 GTF2E2P29084 291 aaKnown RBP6.85□□□□□ -1.31
COL6A3-208ENST00000468792 SHC1P29353 583 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 RBMS1P29558 406 aaKnown RBP6.85□□□□□ -1.31
COL6A3-208ENST00000468792 DCTDP32321 178 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 ACVR1BP36896 505 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 FOLR3P41439 243 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 NR4A2P43354 598 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 HCCSP53701 268 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 GPR85P60893 370 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 INSM1Q01101 510 aaPredicted RBP6.85□□□□□ -1.31
COL6A3-208ENST00000468792 GLO1Q04760 184 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 SELENBP1Q13228 472 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 DNASE1L3Q13609 305 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 ALKBH1Q13686 389 aaKnown RBP6.85□□□□□ -1.31
COL6A3-208ENST00000468792 SSPNQ14714 243 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 BTBD16Q32M84 506 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 TP53I3Q53FA7 332 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 HSD17B12Q53GQ0 312 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 CEP78Q5JTW2 689 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 LIPNQ5VXI9 398 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 SLC18B1Q6NT16 456 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 ZNF544Q6NX49 715 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 H3F3CQ6NXT2 135 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 C3orf33Q6P1S2 294 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 CNIH2Q6PI25 160 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 KCTD18Q6PI47 426 aaPredicted RBP6.85□□□□□ -1.31
COL6A3-208ENST00000468792 BAIAP2L2Q6UXY1 529 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 C16orf47Q6ZP98 133 aaPredicted RBP6.85□□□□□ -1.31
COL6A3-208ENST00000468792 GDPD3Q7L5L3 318 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 NR2C2APQ86WQ0 139 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 ZNF679Q8IYX0 411 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 GTPBP8Q8N3Z3 284 aaPredicted RBP6.85□□□□□ -1.31
COL6A3-208ENST00000468792 RFLNBQ8N5W9 214 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 ZNF511Q8NB15 262 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 FAM83FQ8NEG4 500 aaPredicted RBP6.85□□□□□ -1.31
COL6A3-208ENST00000468792 OR11G2Q8NGC1 345 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 OR10G3Q8NGC4 313 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 OR51L1Q8NGJ5 315 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 OR2I1PQ8NGU4 316 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 ZNF417Q8TAU3 575 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 POC1BQ8TC44 478 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 RHBDD1Q8TEB9 315 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 PAQR8Q8TEZ7 354 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 ASB10Q8WXI3 467 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 C8orf44Q96CB5 159 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 SLC25A36Q96CQ1 311 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 ZC3HAV1LQ96H79 300 aaKnown RBP6.85□□□□□ -1.31
COL6A3-208ENST00000468792 TXNDC15Q96J42 360 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 ADAD1Q96M93 576 aaKnown RBP6.85□□□□□ -1.31
COL6A3-208ENST00000468792 OR8B4Q96RC9 309 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 TAAR9Q96RI9 348 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 ZNF587Q96SQ5 575 aaPredicted RBP6.85□□□□□ -1.31
COL6A3-208ENST00000468792 SYT4Q9H2B2 425 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 RERGLQ9H628 205 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 METTL7AQ9H8H3 244 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 AKIRIN1Q9H9L7 192 aaPredicted RBP6.85□□□□□ -1.31
COL6A3-208ENST00000468792 SRA1Q9HD15 236 aaKnown RBP6.85□□□□□ -1.31
COL6A3-208ENST00000468792 ACOXLQ9NUZ1 547 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 MED11Q9P086 117 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 KLHL9Q9P2J3 617 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 COMMD3Q9UBI1 195 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 MRM2Q9UI43 246 aaKnown RBP6.85□□□□□ -1.31
COL6A3-208ENST00000468792 LAMP5Q9UJQ1 280 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 PADI1Q9ULC6 663 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 TBC1D24Q9ULP9 559 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 PTRH2Q9Y3E5 179 aaKnown RBP6.85□□□□□ -1.31
COL6A3-208ENST00000468792 PCDHGA1Q9Y5H4 931 aa6.85□□□□□ -1.31
COL6A3-208ENST00000468792 PCNX3Q9H6A9 2034 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 CPAMD8Q8IZJ3 1885 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.84□□□□□ -1.31
COL6A3-208ENST00000468792 OR4C45A6NMZ5 311 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 DNPH1O43598 174 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 EFNA2O43921 213 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 TMCC2O75069 709 aa6.84□□□□□ -1.31
COL6A3-208ENST00000468792 AKR7A3O95154 331 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms