RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 EFHD2Q96C19 240 aaPredicted RBP0.9□□□□□ -2.27
SSB-208ENST00000468600 ZNF681Q96N22 645 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 ACAT2Q9BWD1 397 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 TMEM117Q9H0C3 514 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 PARP12Q9H0J9 701 aaKnown RBP0.9□□□□□ -2.27
SSB-208ENST00000468600 IL36GQ9NZH8 169 aa0.9□□□□□ -2.27
SSB-208ENST00000468600 SVILO95425 2214 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 IGKV1D-13A0A0B4J2D9 117 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 ZNF98A6NK75 572 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 F5H6K3 240 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 UBXN8O00124 270 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 ZSCAN12O43309 604 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 TGFAP01135 160 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 HLA-DPB1P04440 258 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 ARL14EPLP0DKL9 152 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 IGKV1-13P0DP09 117 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 IMPDH1P20839 514 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 HTR2AP28223 471 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 NPBWR2P48146 333 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 KLRC3Q07444 240 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 GGTA1PQ4G0N0 100 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 C1orf220Q5T0J3 134 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 AP1ARQ63HQ0 302 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 RAET1GQ6H3X3 334 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 RAB12Q6IQ22 244 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 PRMT9Q6P2P2 845 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 PLA2G4DQ86XP0 818 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 PIANPQ8IYJ0 282 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 OR4S2Q8NH73 311 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 COQ8AQ8NI60 647 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 FAM110BQ8TC76 370 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 LKAAEAR1Q8TD35 194 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 RIT2Q99578 217 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 OSBPL10Q9BXB5 764 aa0.89□□□□□ -2.27
SSB-208ENST00000468600 CHADO15335 359 aa0.88□□□□□ -2.27
SSB-208ENST00000468600 OR1F1O43749 312 aa0.88□□□□□ -2.27
SSB-208ENST00000468600 MBD3O95983 291 aa0.88□□□□□ -2.27
SSB-208ENST00000468600 MMP11P24347 488 aa0.88□□□□□ -2.27
SSB-208ENST00000468600 GSSP48637 474 aa0.88□□□□□ -2.27
SSB-208ENST00000468600 GDI2P50395 445 aaKnown RBP0.88□□□□□ -2.27
SSB-208ENST00000468600 YBEYP58557 167 aaPredicted RBP0.88□□□□□ -2.27
SSB-208ENST00000468600 RABL6Q3YEC7 729 aaPredicted RBP0.88□□□□□ -2.27
SSB-208ENST00000468600 SMUG1Q53HV7 270 aa0.88□□□□□ -2.27
SSB-208ENST00000468600 PEX26Q7Z412 305 aa0.88□□□□□ -2.27
SSB-208ENST00000468600 GMCL1P1Q8NEA9 526 aa0.88□□□□□ -2.27
SSB-208ENST00000468600 OR5D13Q8NGL4 314 aa0.88□□□□□ -2.27
SSB-208ENST00000468600 LILRB4Q8NHJ6 448 aa0.88□□□□□ -2.27
SSB-208ENST00000468600 SPRYD4Q8WW59 207 aaPredicted RBP0.88□□□□□ -2.27
SSB-208ENST00000468600 UFD1Q92890 307 aa0.88□□□□□ -2.27
SSB-208ENST00000468600 MRPL38Q96DV4 380 aaKnown RBP0.88□□□□□ -2.27
SSB-208ENST00000468600 RNF2Q99496 336 aa0.88□□□□□ -2.27
SSB-208ENST00000468600 ZSCAN5AQ9BUG6 496 aa0.88□□□□□ -2.27
SSB-208ENST00000468600 MRPL37Q9BZE1 423 aaKnown RBP0.88□□□□□ -2.27
SSB-208ENST00000468600 DPH5Q9H2P9 285 aa0.88□□□□□ -2.27
SSB-208ENST00000468600 THAP9Q9H5L6 903 aa0.88□□□□□ -2.27
SSB-208ENST00000468600 SGK2Q9HBY8 427 aa0.88□□□□□ -2.27
SSB-208ENST00000468600 MRPL47Q9HD33 250 aaKnown RBP0.88□□□□□ -2.27
SSB-208ENST00000468600 MMP17Q9ULZ9 603 aa0.88□□□□□ -2.27
SSB-208ENST00000468600 CHMP2BQ9UQN3 213 aa0.88□□□□□ -2.27
SSB-208ENST00000468600 KMT2BQ9UMN6 2715 aaPredicted RBP0.88□□□□□ -2.27
SSB-208ENST00000468600 SF3B1O75533 1304 aaKnown RBP eCLIP0.88□□□□□ -2.27
SSB-208ENST00000468600 CIB4A0PJX0 185 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 LANCL1O43813 399 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 AP2A1O95782 977 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 IGHDP01880 384 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 TNNI3P19429 210 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 WARSP23381 471 aaKnown RBP0.87□□□□□ -2.27
SSB-208ENST00000468600 DCKP27707 260 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 GCAP28676 217 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 TGFBR2P37173 567 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 GPR6P46095 362 aaPredicted RBP0.87□□□□□ -2.27
SSB-208ENST00000468600 CASP4P49662 377 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 SUB1P53999 127 aaKnown RBP eCLIP0.87□□□□□ -2.27
SSB-208ENST00000468600 PRPSAP1Q14558 356 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 CNIH2Q6PI25 160 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 CEMP1Q6PRD7 247 aaPredicted RBP0.87□□□□□ -2.27
SSB-208ENST00000468600 CALHM1Q8IU99 346 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 TMEM105Q8N8V8 129 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 SPANXA2-OT1Q8N9U9 137 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 OR13G1Q8NGZ3 307 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 SLC25A46Q96AG3 418 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 SGK3Q96BR1 496 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 SHANK2-AS3Q9BTD1 123 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 MEAF6Q9HAF1 191 aa0.87□□□□□ -2.27
SSB-208ENST00000468600 BTN3A3O00478 584 aa0.86□□□□□ -2.27
SSB-208ENST00000468600 SOCS1O15524 211 aa0.86□□□□□ -2.27
SSB-208ENST00000468600 NEBLO76041 1014 aa0.86□□□□□ -2.27
SSB-208ENST00000468600 PRB1P04280 392 aa0.86□□□□□ -2.27
SSB-208ENST00000468600 ZNF735P0CB33 412 aa0.86□□□□□ -2.27
SSB-208ENST00000468600 TCN1P20061 433 aaPredicted RBP0.86□□□□□ -2.27
SSB-208ENST00000468600 IL1RL1Q01638 556 aa0.86□□□□□ -2.27
SSB-208ENST00000468600 SAXO2Q658L1 398 aa0.86□□□□□ -2.27
SSB-208ENST00000468600 RBM43Q6ZSC3 357 aaKnown RBP0.86□□□□□ -2.27
SSB-208ENST00000468600 SLC35F2Q8IXU6 374 aa0.86□□□□□ -2.27
SSB-208ENST00000468600 ACOT4Q8N9L9 421 aa0.86□□□□□ -2.27
SSB-208ENST00000468600 ZNF680Q8NEM1 530 aa0.86□□□□□ -2.27
SSB-208ENST00000468600 IPMKQ8NFU5 416 aa0.86□□□□□ -2.27
SSB-208ENST00000468600 OR4K5Q8NGD3 323 aa0.86□□□□□ -2.27
SSB-208ENST00000468600 OR8U1Q8NH10 309 aa0.86□□□□□ -2.27
SSB-208ENST00000468600 CIRBP-AS1Q8TBR5 109 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms