RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 PIGXQ8TBF5 258 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 TBC1D15Q8TC07 691 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 MBD6Q96DN6 1003 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 CXXC4Q9H2H0 198 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 EMC3Q9P0I2 261 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 AASSQ9UDR5 926 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 PLEKHA6Q9Y2H5 1048 aa12.82□□□□□ -0.36
COL27A1-203ENST00000468565 A0A1W2PPR1 153 aa12.81□□□□□ -0.36
COL27A1-203ENST00000468565 J3KTA2 159 aa12.81□□□□□ -0.36
COL27A1-203ENST00000468565 WBP4O75554 376 aaKnown RBP12.81□□□□□ -0.36
COL27A1-203ENST00000468565 RAF1P04049 648 aa12.81□□□□□ -0.36
COL27A1-203ENST00000468565 THBDP07204 575 aa12.81□□□□□ -0.36
COL27A1-203ENST00000468565 CD247P20963 164 aa12.81□□□□□ -0.36
COL27A1-203ENST00000468565 PRKAR1BP31321 381 aa12.81□□□□□ -0.36
COL27A1-203ENST00000468565 LIMS1P48059 325 aa12.81□□□□□ -0.36
COL27A1-203ENST00000468565 ENTPD1P49961 510 aa12.81□□□□□ -0.36
COL27A1-203ENST00000468565 SLC16A1P53985 500 aa12.81□□□□□ -0.36
COL27A1-203ENST00000468565 SMN1Q16637 294 aaKnown RBP12.81□□□□□ -0.36
COL27A1-203ENST00000468565 STEAP2Q8NFT2 490 aa12.81□□□□□ -0.36
COL27A1-203ENST00000468565 MYDGFQ969H8 173 aa12.81□□□□□ -0.36
COL27A1-203ENST00000468565 ZC3HAV1LQ96H79 300 aaKnown RBP12.81□□□□□ -0.36
COL27A1-203ENST00000468565 POTEKPQ9BYX7 375 aa12.81□□□□□ -0.36
COL27A1-203ENST00000468565 ACTR6Q9GZN1 396 aa12.81□□□□□ -0.36
COL27A1-203ENST00000468565 PLCXD1Q9NUJ7 323 aa12.81□□□□□ -0.36
COL27A1-203ENST00000468565 DSCAMO60469 2012 aa12.81□□□□□ -0.36
COL27A1-203ENST00000468565 ZNF716A6NP11 495 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 EIF1BO60739 113 aaKnown RBP12.8□□□□□ -0.36
COL27A1-203ENST00000468565 SERPINB7O75635 380 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 MFN2O95140 757 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 CNOT4O95628 575 aaKnown RBP12.8□□□□□ -0.36
COL27A1-203ENST00000468565 CXCR1P25024 350 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 MAP2K4P45985 399 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 OR2B6P58173 313 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 SLC35A1P78382 337 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 H3F3AP84243 136 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 P2RY6Q15077 328 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 MOGQ16653 247 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 SFRP5Q5T4F7 317 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 SYT6Q5T7P8 510 aaPredicted RBP12.8□□□□□ -0.36
COL27A1-203ENST00000468565 SLC16A12Q6ZSM3 486 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 Q6ZT83 130 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 CXorf67Q86X51 503 aaPredicted RBP12.8□□□□□ -0.36
COL27A1-203ENST00000468565 PARP8Q8N3A8 854 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 CADM2Q8N3J6 435 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 C17orf50Q8WW18 174 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 APH1BQ8WW43 257 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 FCGR1BQ92637 280 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 BORCS5Q969J3 196 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 PIK3IP1Q96FE7 263 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 ALPK1Q96QP1 1244 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 USB1Q9BQ65 265 aaKnown RBP12.8□□□□□ -0.36
COL27A1-203ENST00000468565 PAIP2BQ9ULR5 123 aaKnown RBP12.8□□□□□ -0.36
COL27A1-203ENST00000468565 TMCC3Q9ULS5 477 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 ZNF814B7Z6K7 855 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 GPR171O14626 319 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 ATP6V1G1O75348 118 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 GABARAPO95166 117 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 FADS2O95864 444 aaKnown RBP12.8□□□□□ -0.36
COL27A1-203ENST00000468565 PRG2P13727 222 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 CBLP22681 906 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 PSMB9P28065 219 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 LOXP28300 417 aaPredicted RBP12.8□□□□□ -0.36
COL27A1-203ENST00000468565 SMIM11AP58511 58 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 DUSP7Q16829 419 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 BEX5Q5H9J7 111 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 AHSA2Q719I0 299 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 KRT73Q86Y46 540 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 OR9Q2Q8NGE9 314 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 UBE2FQ969M7 185 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 NIPSNAP1Q9BPW8 284 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 SPATA5L1Q9BVQ7 753 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 ACOT13Q9NPJ3 140 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 IMPAD1Q9NX62 359 aa12.8□□□□□ -0.36
COL27A1-203ENST00000468565 ZC3H12DA2A288 527 aaKnown RBP12.79□□□□□ -0.36
COL27A1-203ENST00000468565 SLC22A1O15245 554 aa12.79□□□□□ -0.36
COL27A1-203ENST00000468565 CLPXO76031 633 aa12.79□□□□□ -0.36
COL27A1-203ENST00000468565 ITGADQ13349 1161 aa12.79□□□□□ -0.36
COL27A1-203ENST00000468565 TUSC1Q2TAM9 212 aa12.79□□□□□ -0.36
COL27A1-203ENST00000468565 ZNF829Q3KNS6 432 aaPredicted RBP12.79□□□□□ -0.36
COL27A1-203ENST00000468565 CCDC92Q53HC0 331 aaPredicted RBP12.79□□□□□ -0.36
COL27A1-203ENST00000468565 AQP11Q8NBQ7 271 aa12.79□□□□□ -0.36
COL27A1-203ENST00000468565 RHOXF1Q8NHV9 184 aa12.79□□□□□ -0.36
COL27A1-203ENST00000468565 YIPF6Q96EC8 236 aa12.79□□□□□ -0.36
COL27A1-203ENST00000468565 NAA11Q9BSU3 229 aaPredicted RBP12.79□□□□□ -0.36
COL27A1-203ENST00000468565 COPS4Q9BT78 406 aa12.79□□□□□ -0.36
COL27A1-203ENST00000468565 TBC1D23Q9NUY8 699 aa12.79□□□□□ -0.36
COL27A1-203ENST00000468565 PRSS50Q9UI38 385 aa12.79□□□□□ -0.36
COL27A1-203ENST00000468565 PSORS1C1Q9UIG5 152 aa12.79□□□□□ -0.36
COL27A1-203ENST00000468565 HIVEP1P15822 2718 aa12.79□□□□□ -0.36
COL27A1-203ENST00000468565 A8MVM7 634 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 KLF4O43474 513 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 PFDN1O60925 122 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 ADAP00813 363 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 IL32P24001 234 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 IDUAP35475 653 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 GSSP48637 474 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 CDC42P60953 191 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 CTF1Q16619 201 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 PAQR6Q6TCH4 344 aa12.78□□□□□ -0.36
COL27A1-203ENST00000468565 P2RY8Q86VZ1 359 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms