RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 NPIPA5E9PKD4 350 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 C11orf98E9PRG8 122 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 BLOC1S5-TXNDC5H3BN57 136 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 TFECO14948 347 aaPredicted RBP3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 CASQ2O14958 399 aaPredicted RBP3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 SEC14L5O43304 696 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 EFNA2O43921 213 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 DPM1O60762 260 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 SERPINI2O75830 405 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 WISP2O76076 250 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 OR6A2O95222 327 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 SOX14O95416 240 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 AHSA1O95433 338 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 SNAP29O95721 258 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 THRBP10828 461 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF26P17031 533 aaPredicted RBP3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 AHCYP23526 432 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 IGFBP5P24593 272 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 MST1P26927 711 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 GTF2E2P29084 291 aaKnown RBP3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 SRD5A2P31213 254 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 UQCRC1P31930 480 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 GCKP35557 465 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 POLR2IP36954 125 aaKnown RBP3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 LIPAP38571 399 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 APOBEC1P41238 236 aaKnown RBP3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 OMPP47874 163 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 ALDH3A2P51648 485 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 RAD23AP54725 363 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 TPTEP56180 551 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 PRKCDQ05655 676 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 LTBQ06643 244 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 FOXO1Q12778 655 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 DGCR6Q14129 220 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 OR7A5Q15622 319 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 PLPPR5Q32ZL2 321 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 LINC00303Q3SY05 128 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 NADK2Q4G0N4 442 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 GXYLT1Q4G148 440 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 CLEC12AQ5QGZ9 265 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 C6orf52Q5T4I8 152 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 C1orf140Q5VVS0 124 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 TMEM236Q5W0B7 351 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 C1orf94Q6P1W5 598 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 TMEM81Q6P7N7 255 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 IGFL2Q6UWQ7 119 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 Q6ZPB1 254 aaPredicted RBP3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 IGFN1Q86VF2 1251 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 SLC22A16Q86VW1 577 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 RNF113BQ8IZP6 322 aaKnown RBP3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 KDM8Q8N371 416 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 LINC00471Q8N535 108 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 DHRSXQ8N5I4 330 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 RBMXL3Q8N7X1 1067 aaKnown RBP3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 LSMEM1Q8N8F7 131 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 TEX19Q8NA77 164 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 FAM83FQ8NEG4 500 aaPredicted RBP3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF555Q8NEP9 628 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 OR13C2Q8NGS9 318 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 C9orf43Q8TAL5 461 aaPredicted RBP3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 RNF138Q8WVD3 245 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 DNAJC9Q8WXX5 260 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 ST8SIA1Q92185 356 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 TAAR8Q969N4 342 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 OTULINQ96BN8 352 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 DDIT4LQ96D03 193 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 R3HDM4Q96D70 268 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 BPIFA2Q96DR5 249 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 NRBF2Q96F24 287 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 SCMH1Q96GD3 660 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 MPP4Q96JB8 637 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 SAMD8Q96LT4 415 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 SORCS2Q96PQ0 1159 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 OR5B2Q96R09 309 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 TNFRSF13CQ96RJ3 184 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 GPA33Q99795 319 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 PIGQQ9BRB3 760 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 TAPBPLQ9BX59 468 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 OSBPL10Q9BXB5 764 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 EGLN3Q9H6Z9 239 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 HHATLQ9HCP6 504 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 MEPEQ9NQ76 525 aaPredicted RBP3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 PAPOLBQ9NRJ5 636 aaKnown RBP3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 C20orf141Q9NUB4 165 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 SERTAD4Q9NUC0 356 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 DNAJB11Q9UBS4 358 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 CHRNA9Q9UGM1 479 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 IL20RAQ9UHF4 553 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 NPIPA1Q9UND3 350 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 DMRT1Q9Y5R6 373 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 SPIN1Q9Y657 262 aaPredicted RBP3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 WDFY3Q8IZQ1 3526 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 EML6Q6ZMW3 1958 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 DOCK10Q96BY6 2186 aa3.65□□□□□ -1.83
TMEM39A-204ENST00000468545 TNRC6AQ8NDV7 1962 aaKnown RBP3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 IGKV1D-42A0A075B6H8 117 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 TRAV36DV7A0A075B6V5 113 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 TRGV5A0A0B4J1U4 118 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 IGHV3-15A0A0B4J1V0 119 aa3.64□□□□□ -1.83
TMEM39A-204ENST00000468545 LOC100130705A0A1B0GUX0 176 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms