RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 EFCAB10A6NFE3 127 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 DLL1O00548 723 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 SMAD9O15198 467 aaKnown RBP7.42□□□□□ -1.22
BRCA1-208ENST00000468300 APOL3O95236 402 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 MT-ATP6P00846 226 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 ACAA1P09110 424 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-208ENST00000468300 SPINK2P20155 84 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 DCKP27707 260 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 ADH6P28332 368 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 GRPRP30550 384 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 CYB561P49447 251 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 ZNF41P51814 821 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-208ENST00000468300 DSCR4P56555 118 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-208ENST00000468300 SGCBQ16585 318 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 CNPY1Q3B7I2 92 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 DEGS2Q6QHC5 323 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 SHFQ7M4L6 423 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 GTPBP8Q8N3Z3 284 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-208ENST00000468300 OR1J4Q8NGS1 313 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 ZNF519Q8TB69 540 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 MYDGFQ969H8 173 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 RNFT2Q96EX2 444 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 Q96M85 177 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 ZNF552Q9H707 407 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-208ENST00000468300 SACM1LQ9NTJ5 587 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 B3GAT1Q9P2W7 334 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 DIMT1Q9UNQ2 313 aaKnown RBP7.42□□□□□ -1.22
BRCA1-208ENST00000468300 RNF24Q9Y225 148 aa7.42□□□□□ -1.22
BRCA1-208ENST00000468300 TNRC6AQ8NDV7 1962 aaKnown RBP7.41□□□□□ -1.22
BRCA1-208ENST00000468300 ATMQ13315 3056 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 A0A1B0GVC2 190 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 A0A1W2PPL8 197 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 ZNF99A8MXY4 864 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-208ENST00000468300 IGHMP01871 453 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 IGHA1P01876 353 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 OPN1LWP04000 364 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 CNR1P21554 472 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 TCEA1P23193 301 aaKnown RBP7.41□□□□□ -1.22
BRCA1-208ENST00000468300 ITGA3P26006 1051 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 MTNR1AP48039 350 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.41□□□□□ -1.22
BRCA1-208ENST00000468300 MYBPHQ13203 477 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 ALG10Q5BKT4 473 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 SPATC1Q76KD6 591 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 GALNT16Q8N428 558 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 SDR9C7Q8NEX9 313 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 OR52E2Q8NGJ4 325 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 OR5J2Q8NH18 312 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 OR4K13Q8NH42 304 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 MFSD8Q8NHS3 518 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 ZNF417Q8TAU3 575 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 ZBTB8AQ96BR9 441 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 DGCR14Q96DF8 476 aaKnown RBP7.41□□□□□ -1.22
BRCA1-208ENST00000468300 ZNF587Q96SQ5 575 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-208ENST00000468300 NMNAT3Q96T66 252 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 JAM3Q9BX67 310 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 POTEKPQ9BYX7 375 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 CCDC90BQ9GZT6 254 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 LRFN1Q9P244 771 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 COMMD3-BMI1R4GMX3 469 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 TEX13CA0A0J9YWL9 993 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 ARGFXA6NJG6 315 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 B8ZZF3 427 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 DCTN6O00399 190 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 TLX3O43711 291 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-208ENST00000468300 GYPBP06028 91 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 CD14P08571 375 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 LIMS3P0CW19 117 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 LIMS4P0CW20 117 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 PCSK6P29122 969 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 LIPAP38571 399 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 RAB40BQ12829 278 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 MEPCEQ7L2J0 689 aaKnown RBP7.41□□□□□ -1.22
BRCA1-208ENST00000468300 NANOGP1Q8N7R0 232 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 OR4F15Q8NGB8 312 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 OR10Z1Q8NGY1 313 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 SLC25A36Q96CQ1 311 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 TMEM80Q96HE8 168 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 FER1L6-AS2Q96M78 137 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 TEAD3Q99594 435 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 ZNF346Q9UL40 294 aaKnown RBP7.41□□□□□ -1.22
BRCA1-208ENST00000468300 CSAG2Q9Y5P2 127 aa7.41□□□□□ -1.22
BRCA1-208ENST00000468300 CNOT1A5YKK6 2376 aaKnown RBP7.41□□□□□ -1.22
BRCA1-208ENST00000468300 A0A087WZY1 265 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 HSBP1L1C9JCN9 74 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 H3BML4 177 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 CRTAPO75718 401 aaPredicted RBP7.4□□□□□ -1.22
BRCA1-208ENST00000468300 CBR3O75828 277 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 HK1P19367 917 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 DPP4P27487 766 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 SDHAP31040 664 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 BMI1P35226 326 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 CAPZA2P47755 286 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 EIF2B2P49770 351 aaKnown RBP7.4□□□□□ -1.22
BRCA1-208ENST00000468300 MAP2K6P52564 334 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 CDH11P55287 796 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 CLDN15P56746 228 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 ZP4Q12836 540 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 SPCS2Q15005 226 aa7.4□□□□□ -1.22
BRCA1-208ENST00000468300 GLYR1Q49A26 553 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms