RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 ACPTQ9BZG2 426 aa9.61□□□□□ -0.87
VPS26A-204ENST00000467852 ADPRHL2Q9NX46 363 aa9.61□□□□□ -0.87
VPS26A-204ENST00000467852 NOP53Q9NZM5 478 aaKnown RBP9.61□□□□□ -0.87
VPS26A-204ENST00000467852 ZNRD1Q9P1U0 126 aa9.61□□□□□ -0.87
VPS26A-204ENST00000467852 CLN8Q9UBY8 286 aa9.61□□□□□ -0.87
VPS26A-204ENST00000467852 POFUT2Q9Y2G5 429 aa9.61□□□□□ -0.87
VPS26A-204ENST00000467852 ZC3H12DA2A288 527 aaKnown RBP9.6□□□□□ -0.87
VPS26A-204ENST00000467852 OR4F21O95013 312 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 LIPFP07098 398 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 ZNF43P17038 809 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 SLC6A2P23975 617 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 SPRP35270 261 aaPredicted RBP9.6□□□□□ -0.87
VPS26A-204ENST00000467852 PITPNBP48739 271 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 COX10Q12887 443 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 PLECQ15149 4684 aaKnown RBP9.6□□□□□ -0.87
VPS26A-204ENST00000467852 PPP1R7Q15435 360 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 ZNF141Q15928 474 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 ZNF718Q3SXZ3 478 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 SPRNQ5BIV9 151 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 ZMAT1Q5H9K5 638 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 SPDYAQ5MJ70 313 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 METTL11BQ5VVY1 283 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 UNQ9370/PRO34162Q6UXP9 181 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 ZNF584Q8IVC4 421 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 PPP1R35Q8TAP8 253 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 GRK7Q8WTQ7 553 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 GATAD1Q8WUU5 269 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 CIDECQ96AQ7 238 aaPredicted RBP9.6□□□□□ -0.87
VPS26A-204ENST00000467852 RANBP3Q9H6Z4 567 aaPredicted RBP9.6□□□□□ -0.87
VPS26A-204ENST00000467852 ZCCHC3Q9NUD5 404 aaKnown RBP9.6□□□□□ -0.87
VPS26A-204ENST00000467852 SIRT5Q9NXA8 310 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 OSGIN1Q9UJX0 560 aa9.6□□□□□ -0.87
VPS26A-204ENST00000467852 FAF1Q9UNN5 650 aaPredicted RBP9.6□□□□□ -0.87
VPS26A-204ENST00000467852 ZSCAN5BA6NJL1 495 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 STX16-NPEPL1H3BU86 382 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 M0R3G1 203 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 PPP6CO00743 305 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 STX16O14662 325 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 ZNF500O60304 480 aaPredicted RBP9.59□□□□□ -0.87
VPS26A-204ENST00000467852 SASH3O75995 380 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 KRT16P08779 473 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 CCL2P13500 99 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 MMP9P14780 707 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 P2RY4P51582 365 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 SNX32Q86XE0 403 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 CALHM3Q86XJ0 350 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 PAQR4Q8N4S7 273 aaPredicted RBP9.59□□□□□ -0.87
VPS26A-204ENST00000467852 FBXO36Q8NEA4 188 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 OR1J2Q8NGS2 313 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 OR1J1Q8NGS3 322 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 FAM120BQ96EK7 910 aaKnown RBP9.59□□□□□ -0.87
VPS26A-204ENST00000467852 SAMD8Q96LT4 415 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 WDFY2Q96P53 400 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 SIGLEC11Q96RL6 698 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 PRPF18Q99633 342 aaKnown RBP9.59□□□□□ -0.87
VPS26A-204ENST00000467852 ARHGDIGQ99819 225 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 LRMDAQ9H2I8 198 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 ZNF224Q9NZL3 707 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 CGGBP1Q9UFW8 167 aaPredicted RBP9.59□□□□□ -0.87
VPS26A-204ENST00000467852 TMCO1Q9UM00 188 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 SLC35A3Q9Y2D2 325 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 LSM4Q9Y4Z0 139 aaKnown RBP9.59□□□□□ -0.87
VPS26A-204ENST00000467852 KCNE3Q9Y6H6 103 aa9.59□□□□□ -0.87
VPS26A-204ENST00000467852 A0A1W2PRX2 142 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 GOLGA6L22H0YM25 854 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 AKAP8O43823 692 aaKnown RBP9.58□□□□□ -0.88
VPS26A-204ENST00000467852 MFN2O95140 757 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 CLIC3O95833 236 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 OPN1SWP03999 348 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 CCDC159P0C7I6 412 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 B4GALT1P15291 398 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 TNFSF4P23510 183 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 TACR3P29371 465 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 PGM1P36871 562 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 AQP5P55064 265 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 CDH13P55290 713 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 ARL4CP56559 192 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 DGCR2P98153 550 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 TBC1D28Q2M2D7 210 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 FAM219BQ5XKK7 198 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 EMBQ6PCB8 327 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 RPS27LQ71UM5 84 aaKnown RBP9.58□□□□□ -0.88
VPS26A-204ENST00000467852 ZNF627Q7L945 461 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 CCDC91Q7Z6B0 441 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 LRRC8AQ8IWT6 810 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 PDZD9Q8IXQ8 264 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 CENPLQ8N0S6 344 aaPredicted RBP9.58□□□□□ -0.88
VPS26A-204ENST00000467852 ARFGAP2Q8N6H7 521 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 CITED4Q96RK1 184 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 SDF2Q99470 211 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 CDADC1Q9BWV3 514 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 C1orf198Q9H425 327 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 B3GAT2Q9NPZ5 323 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 KCNE5Q9UJ90 142 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 PPP1R3CQ9UQK1 317 aa9.58□□□□□ -0.88
VPS26A-204ENST00000467852 TMEM178BH3BS89 294 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 PHYHO14832 338 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 PEX14O75381 377 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 UGT2B17O75795 530 aa9.57□□□□□ -0.88
VPS26A-204ENST00000467852 SNAP29O95721 258 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms