RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 RUNX1T1Q06455 604 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 MELKQ14680 651 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 GSG1Q2KHT4 349 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 VMACQ2NL98 169 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 NANOGP8Q6NSW7 305 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 CGB2Q6NT52 195 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 PODNL1Q6PEZ8 512 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 SLC35D2Q76EJ3 337 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 LRP11Q86VZ4 500 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 CALHM3Q86XJ0 350 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 SKA3Q8IX90 412 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 CCDC36Q8IYA8 594 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 TSPEARQ8WU66 669 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 FOXB1Q99853 325 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 TMEM120AQ9BXJ8 343 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 BEX2Q9BXY8 128 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 MRPL37Q9BZE1 423 aaKnown RBP12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 PCDHAC1Q9H158 963 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 EVA1AQ9H8M9 152 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 CHODLQ9H9P2 273 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 NANOGQ9H9S0 305 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 MOV10Q9HCE1 1003 aaKnown RBP12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 MRGBPQ9NV56 204 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 TMEM160Q9NX00 188 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 FAM53CQ9NYF3 392 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 MYEF2Q9P2K5 600 aaKnown RBP12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 CDC42EP3Q9UKI2 254 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 TRIM33Q9UPN9 1127 aa12.73□□□□□ -0.37
ATPAF2-204ENST00000467560 LOC100289279A0A1B0GTE1 492 aa12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 TRAPPC13A5PLN9 417 aa12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 PHF1O43189 567 aaPredicted RBP12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 LMX1BO60663 402 aa12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 SHOX2O60902 331 aaPredicted RBP12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 ASAH2BP0C7U1 165 aa12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 APEHP13798 732 aaKnown RBP12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 FUT4P22083 530 aa12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 PTDSS1P48651 473 aaKnown RBP12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 RAB1AP62820 205 aa12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 ZP4Q12836 540 aa12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 RAB39AQ14964 217 aa12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 TRMT5Q32P41 509 aaKnown RBP12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 CCDC80Q76M96 950 aa12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 PATL1Q86TB9 770 aaKnown RBP12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 PAQR4Q8N4S7 273 aaPredicted RBP12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 OR6X1Q8NH79 312 aa12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 RAB1BQ9H0U4 201 aa12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 TPK1Q9H3S4 243 aa12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 B3GAT2Q9NPZ5 323 aa12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 GLTPQ9NZD2 209 aa12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 FZR1Q9UM11 496 aa12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 ANK2Q01484 3957 aa12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 NBEAL1Q6ZS30 2694 aa12.72□□□□□ -0.37
ATPAF2-204ENST00000467560 RNF13O43567 381 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 LILRA1O75019 489 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 IFNA2P01563 188 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 ZNF23P17027 643 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 GZMKP49863 264 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 SEC24CP53992 1094 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 UGT2B15P54855 530 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 GUCY1A3Q02108 690 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 TRIP10Q15642 601 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 FXNQ16595 210 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 IQCCQ4KMZ1 466 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 FAM120AOSQ5T036 256 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 TTC33Q6PID6 262 aaPredicted RBP12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 CARM1Q86X55 608 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 NKAIN4Q8IVV8 208 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 PFN4Q8NHR9 129 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 MRPL24Q96A35 216 aaKnown RBP12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 SH3GL3Q99963 347 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 SYT3Q9BQG1 590 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 NANSQ9NR45 359 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 C20orf141Q9NUB4 165 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 ZNF229Q9UJW7 825 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 CMAHPQ9Y471 501 aa12.71□□□□□ -0.37
ATPAF2-204ENST00000467560 OR6A2O95222 327 aa12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 PGA4P0DJD7 388 aa12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 PGA3P0DJD8 388 aa12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 TROVE2P10155 538 aaKnown RBP eCLIP12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 TCN1P20061 433 aaPredicted RBP12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 GIFP27352 417 aa12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 ALDH3B1P43353 468 aa12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 RIN1Q13671 783 aa12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 MAD2L1BPQ15013 274 aaPredicted RBP12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 METTL21CQ5VZV1 264 aa12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 SLC22A24Q8N4F4 322 aa12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 IL17RDQ8NFM7 739 aa12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 TMEM255BQ8WV15 326 aa12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 ZNF566Q969W8 418 aa12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 LRRC58Q96CX6 371 aa12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 ZNF583Q96ND8 569 aa12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 ZNF347Q96SE7 839 aa12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 SHARPINQ9H0F6 387 aa12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 DYNLRB1Q9NP97 96 aa12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 MYOZ1Q9NP98 299 aaPredicted RBP12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 TMEM38BQ9NVV0 291 aa12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 GMPR2Q9P2T1 348 aaKnown RBP12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 SH3GLB1Q9Y371 365 aa12.7□□□□□ -0.38
ATPAF2-204ENST00000467560 DHHO43323 396 aa12.69□□□□□ -0.38
ATPAF2-204ENST00000467560 RAB36O95755 333 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms