RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 IGHV3-13P01766 116 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 OR12D1P0DN82 309 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 NEFHP12036 1026 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 BPIFB3P59826 476 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 PAX2Q02962 417 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 FUT5Q11128 374 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 ZMYND11Q15326 602 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 TBC1D28Q2M2D7 210 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 NRN1LQ496H8 165 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 RFTN2Q52LD8 501 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-203ENST00000467533 ATG16L1Q676U5 607 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 CLEC6AQ6EIG7 209 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 SNX32Q86XE0 403 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 C20orf196Q8IYI0 205 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 C11orf44Q8N8P7 122 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 OR1J1Q8NGS3 322 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 OR2T11Q8NH01 316 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 XAGE5Q8WWM1 108 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 RAB40AQ8WXH6 277 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 ITPKCQ96DU7 683 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 OXGR1Q96P68 337 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 PAFAH2Q99487 392 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 OCSTAMPQ9BR26 566 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 TNFRSF12AQ9NP84 129 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 TMEM106BQ9NUM4 274 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 B3GAT1Q9P2W7 334 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 TMED5Q9Y3A6 229 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 FIS1Q9Y3D6 152 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 DOCK11Q5JSL3 2073 aa8.56□□□□□ -1.04
HDAC3-203ENST00000467533 CEACAM18A8MTB9 384 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 TMEM114B3SHH9 223 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 GUSBP08236 651 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 THRBP10828 461 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 RPS2P15880 293 aaKnown RBP8.55□□□□□ -1.04
HDAC3-203ENST00000467533 MDH2P40926 338 aaKnown RBP8.55□□□□□ -1.04
HDAC3-203ENST00000467533 RPS5P46782 204 aaKnown RBP8.55□□□□□ -1.04
HDAC3-203ENST00000467533 MMP15P51511 669 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 UCP2P55851 309 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 FGF12P61328 243 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 HBA1P69905 142 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 TNFAIP6P98066 277 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-203ENST00000467533 CAV1Q03135 178 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 GSTA3Q16772 222 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 SPRNQ5BIV9 151 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 SPATA46Q5T0L3 261 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 AP1ARQ63HQ0 302 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 TNFAIP8L2Q6P589 184 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-203ENST00000467533 ZNF627Q7L945 461 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 LRRC28Q86X40 367 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-203ENST00000467533 CREG2Q8IUH2 290 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 MUC20Q8N307 709 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-203ENST00000467533 NATD1Q8N6N6 113 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 OR4S1Q8NGB4 309 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 MFSD8Q8NHS3 518 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 FGFBP3Q8TAT2 258 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 IPCEF1Q8WWN9 437 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-203ENST00000467533 NUDT16L1Q9BRJ7 211 aaKnown RBP8.55□□□□□ -1.04
HDAC3-203ENST00000467533 PCGF1Q9BSM1 259 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 EMC6Q9BV81 110 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 DPY30Q9C005 99 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 C1orf198Q9H425 327 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 KIF17Q9P2E2 1029 aa8.55□□□□□ -1.04
HDAC3-203ENST00000467533 A0A096LPI6 279 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 FTCDNL1E5RQL4 147 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 TNFRSF13BO14836 293 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-203ENST00000467533 AIM2O14862 343 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 LSM1O15116 133 aaKnown RBP8.54□□□□□ -1.04
HDAC3-203ENST00000467533 RAD51CO43502 376 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 MFN2O95140 757 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 SNAP29O95721 258 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 UQCRC2P22695 453 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 PAFAH1B1P43034 410 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 COPZ1P61923 177 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 GNA13Q14344 377 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 MRPL2Q5T653 305 aaKnown RBP8.54□□□□□ -1.04
HDAC3-203ENST00000467533 WBP2NLQ6ICG8 309 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 TMEM53Q6P2H8 277 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 FRMD7Q6ZUT3 714 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 UEVLDQ8IX04 471 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 SKA3Q8IX90 412 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 MIER2Q8N344 545 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 OR1J2Q8NGS2 313 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 OR6N1Q8NGY5 312 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 PNPT1Q8TCS8 783 aaKnown RBP8.54□□□□□ -1.04
HDAC3-203ENST00000467533 GATAD2BQ8WXI9 593 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 LRTOMTQ8WZ04 291 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 PLEKHA8Q96JA3 519 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 LRMDAQ9H2I8 198 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 RNF121Q9H920 327 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 TCF7L2Q9NQB0 619 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 CYSLTR2Q9NS75 346 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 ACOXLQ9NUZ1 547 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 PCDHGB5Q9Y5G0 923 aa8.54□□□□□ -1.04
HDAC3-203ENST00000467533 KIR2DS1A0A191URI9 304 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 POC1B-GALNT4F8VUJ3 575 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 C3orf84H3BNL1 204 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 M0R082 166 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 NPIPB7O75200 414 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 CD55P08174 381 aa8.53□□□□□ -1.04
HDAC3-203ENST00000467533 ADH4P08319 380 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms