RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 CSNK2A2P19784 350 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-207ENST00000467273 PTNP21246 168 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 CXCR5P32302 372 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 BSGP35613 385 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 OR3A2P47893 321 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 DSTNP60981 165 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 BLOC1S1P78537 153 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 FOXI1Q12951 378 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 CRYMQ14894 314 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 TSC22D1Q15714 1073 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 ZNF239Q16600 458 aaKnown RBP4.7□□□□□ -1.66
PTCD3-207ENST00000467273 AANATQ16613 207 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 Q3ZCU0 254 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 RNASE12Q5GAN4 147 aaKnown RBP4.7□□□□□ -1.66
PTCD3-207ENST00000467273 SPANXN3Q5MJ09 141 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 KRTAP5-11Q6L8G4 156 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 DDIASQ8IXT1 998 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 ZNF679Q8IYX0 411 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 GTPBP8Q8N3Z3 284 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-207ENST00000467273 SPATA6LQ8N4H0 392 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 OR52L2PQ8NGH6 319 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 PSMA8Q8TAA3 256 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 ZNF675Q8TD23 568 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 ACTRT2Q8TDY3 377 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 TRPC4APQ8TEL6 797 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 GLMPQ8WWB7 406 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 LINC00476Q8WZB0 136 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 EXT2Q93063 718 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 TMEM79Q9BSE2 394 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 THAP7Q9BT49 309 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-207ENST00000467273 ELOVL1Q9BW60 279 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 DERL2Q9GZP9 239 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 OR51B5Q9H339 312 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 DDX28Q9NUL7 540 aaKnown RBP4.7□□□□□ -1.66
PTCD3-207ENST00000467273 SMPD3Q9NY59 655 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-207ENST00000467273 MAT2BQ9NZL9 334 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 NPAP1Q9NZP6 1156 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 ATP6V1HQ9UI12 483 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 PLLPQ9Y342 182 aa4.7□□□□□ -1.66
PTCD3-207ENST00000467273 NPIPA5A0A0B4J1W7 369 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 A0A1B0GWJ7 208 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 LRP5LA4QPB2 252 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 MFSD2BA6NFX1 497 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 LIPT2A6NK58 231 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 GJE1A6NN92 205 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 WASHC1A8K0Z3 465 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 ZNF814B7Z6K7 855 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 NPIPA7E9PJI5 369 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 TAPBPO15533 448 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 RGS14O43566 566 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 EEDO75530 441 aaKnown RBP4.69□□□□□ -1.66
PTCD3-207ENST00000467273 LYZL6O75951 148 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 LY6HO94772 140 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 KLHL2O95198 593 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 ECDO95905 644 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-207ENST00000467273 BCL10O95999 233 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 OTCP00480 354 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 TFP02787 698 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 NPSP0C0P6 89 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 STAG3L3P0CL85 134 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 NPIPA8P0DM63 369 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 SELLP14151 372 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 CHN1P15882 459 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 TCEA1P23193 301 aaKnown RBP4.69□□□□□ -1.66
PTCD3-207ENST00000467273 ELK4P28324 431 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 NUP62P37198 522 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-207ENST00000467273 HTR2BP41595 481 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 PPOXP50336 477 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 PSMD4P55036 377 aaKnown RBP4.69□□□□□ -1.66
PTCD3-207ENST00000467273 ELLP55199 621 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-207ENST00000467273 STX1BP61266 288 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 UBA52P62987 128 aaKnown RBP4.69□□□□□ -1.66
PTCD3-207ENST00000467273 RASGEF1BQ0VAM2 473 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 PCLAFQ15004 111 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 EXOSC7Q15024 291 aaKnown RBP4.69□□□□□ -1.66
PTCD3-207ENST00000467273 TSNQ15631 228 aaKnown RBP4.69□□□□□ -1.66
PTCD3-207ENST00000467273 EFNB3Q15768 340 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 LCE1AQ5T7P2 110 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 ATAD3BQ5T9A4 648 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 CPTPQ5TA50 214 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 LIPJQ5W064 366 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 HBMQ6B0K9 141 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 SLC48A1Q6P1K1 146 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 ANKRD16Q6P6B7 361 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 B3GLCTQ6Y288 498 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 PAGE2Q7Z2X7 111 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 NUFIP2Q7Z417 695 aaKnown RBP4.69□□□□□ -1.66
PTCD3-207ENST00000467273 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-207ENST00000467273 ELMOD2Q8IZ81 293 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 ZNF786Q8N393 782 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 ARFGAP2Q8N6H7 521 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 EIF1ADQ8N9N8 165 aaKnown RBP4.69□□□□□ -1.66
PTCD3-207ENST00000467273 POC5Q8NA72 575 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 OR52R1Q8NGF1 315 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 DUSP19Q8WTR2 217 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 SCARB1Q8WTV0 552 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 OSTF1Q92882 214 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 TMEM186Q96B77 213 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 NXNL1Q96CM4 212 aa4.69□□□□□ -1.66
PTCD3-207ENST00000467273 PHF21BQ96EK2 531 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms