RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 BCL10O95999 233 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 IFNA14P01570 189 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 ZNF23P17027 643 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 NR4A1P22736 598 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 IFNA8P32881 189 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 ZNF84P51523 738 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 PCBP3P57721 371 aaKnown RBP15.15■□□□□ 0.02
COL7A1-206ENST00000466591 MELKQ14680 651 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 ZNF74Q16587 644 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 TMEM53Q6P2H8 277 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 PIWIL3Q7Z3Z3 882 aaKnown RBP15.15■□□□□ 0.02
COL7A1-206ENST00000466591 CDK20Q8IZL9 346 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 ZCCHC24Q8N2G6 241 aaKnown RBP15.15■□□□□ 0.02
COL7A1-206ENST00000466591 UBASH3BQ8TF42 649 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 STON2Q8WXE9 905 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 SYT3Q9BQG1 590 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 WFDC6Q9BQY6 131 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 MS4A5Q9H3V2 200 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 KAT8Q9H7Z6 458 aaKnown RBP15.15■□□□□ 0.02
COL7A1-206ENST00000466591 GLTPQ9NZD2 209 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 DUSP13Q9UII6 198 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 ZNF229Q9UJW7 825 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 SH3GLB1Q9Y371 365 aa15.15■□□□□ 0.02
COL7A1-206ENST00000466591 A0A1W2PRG6 482 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 VWC2LB2RUY7 222 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 SYNGR3O43761 229 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 EDF1O60869 148 aaKnown RBP15.14■□□□□ 0.01
COL7A1-206ENST00000466591 STAMBPO95630 424 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 IGHG1P01857 330 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 OR8G3PP0DMU2 310 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 APEX1P27695 318 aaKnown RBP15.14■□□□□ 0.01
COL7A1-206ENST00000466591 MAPRE2Q15555 327 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 NPTX1Q15818 432 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 VMACQ2NL98 169 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 METTL21CQ5VZV1 264 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 REP15Q6BDI9 236 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 DEF8Q6ZN54 512 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 IL17RELQ6ZVW7 336 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 HDDC2Q7Z4H3 204 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 RETREG3Q86VR2 466 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 RBM45Q8IUH3 476 aaKnown RBP15.14■□□□□ 0.01
COL7A1-206ENST00000466591 ARIH2OSQ8N7S6 290 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 OR6X1Q8NH79 312 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 MSI2Q96DH6 328 aaKnown RBP15.14■□□□□ 0.01
COL7A1-206ENST00000466591 SLC25A44Q96H78 314 aaPredicted RBP15.14■□□□□ 0.01
COL7A1-206ENST00000466591 SNX18Q96RF0 628 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 DOK1Q99704 481 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 TMEM120AQ9BXJ8 343 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 RSPO3Q9BXY4 272 aaPredicted RBP15.14■□□□□ 0.01
COL7A1-206ENST00000466591 SLC19A3Q9BZV2 496 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 KCNN2Q9H2S1 579 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 VIPAS39Q9H9C1 493 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 CDH20Q9HBT6 801 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 REV1Q9UBZ9 1251 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 SLC7A8Q9UHI5 535 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 GPR160Q9UJ42 338 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 BAG5Q9UL15 447 aa15.14■□□□□ 0.01
COL7A1-206ENST00000466591 LRP5LA4QPB2 252 aa15.13■□□□□ 0.01
COL7A1-206ENST00000466591 IGFBP5P24593 272 aa15.13■□□□□ 0.01
COL7A1-206ENST00000466591 SRP14P37108 136 aaKnown RBP15.13■□□□□ 0.01
COL7A1-206ENST00000466591 PLP2Q04941 152 aa15.13■□□□□ 0.01
COL7A1-206ENST00000466591 RAB39AQ14964 217 aa15.13■□□□□ 0.01
COL7A1-206ENST00000466591 NKPD1Q17RQ9 610 aa15.13■□□□□ 0.01
COL7A1-206ENST00000466591 SLC36A2Q495M3 483 aa15.13■□□□□ 0.01
COL7A1-206ENST00000466591 FAM120AOSQ5T036 256 aa15.13■□□□□ 0.01
COL7A1-206ENST00000466591 SLC22A24Q8N4F4 322 aa15.13■□□□□ 0.01
COL7A1-206ENST00000466591 ICA1LQ8NDH6 482 aa15.13■□□□□ 0.01
COL7A1-206ENST00000466591 GPR32P1Q8NGA4 272 aa15.13■□□□□ 0.01
COL7A1-206ENST00000466591 SNX33Q8WV41 574 aa15.13■□□□□ 0.01
COL7A1-206ENST00000466591 MRPL24Q96A35 216 aaKnown RBP15.13■□□□□ 0.01
COL7A1-206ENST00000466591 TAMM41Q96BW9 452 aa15.13■□□□□ 0.01
COL7A1-206ENST00000466591 LRMDAQ9H2I8 198 aa15.13■□□□□ 0.01
COL7A1-206ENST00000466591 B3GNT2Q9NY97 397 aa15.13■□□□□ 0.01
COL7A1-206ENST00000466591 ZNF346Q9UL40 294 aaKnown RBP15.13■□□□□ 0.01
COL7A1-206ENST00000466591 FZR1Q9UM11 496 aa15.13■□□□□ 0.01
COL7A1-206ENST00000466591 IQCMA0A1B0GVH7 501 aa15.12■□□□□ 0.01
COL7A1-206ENST00000466591 PTHP01270 115 aa15.12■□□□□ 0.01
COL7A1-206ENST00000466591 QDPRP09417 244 aa15.12■□□□□ 0.01
COL7A1-206ENST00000466591 PATE4P0C8F1 98 aa15.12■□□□□ 0.01
COL7A1-206ENST00000466591 TCN1P20061 433 aaPredicted RBP15.12■□□□□ 0.01
COL7A1-206ENST00000466591 GLRXP35754 106 aa15.12■□□□□ 0.01
COL7A1-206ENST00000466591 DAP3P51398 398 aaKnown RBP15.12■□□□□ 0.01
COL7A1-206ENST00000466591 SF3A3Q12874 501 aaKnown RBP eCLIP15.12■□□□□ 0.01
COL7A1-206ENST00000466591 LRRC23Q53EV4 343 aaPredicted RBP15.12■□□□□ 0.01
COL7A1-206ENST00000466591 ERICH5Q6P6B1 374 aa15.12■□□□□ 0.01
COL7A1-206ENST00000466591 UGT2A3Q6UWM9 527 aa15.12■□□□□ 0.01
COL7A1-206ENST00000466591 SLC16A14Q7RTX9 510 aa15.12■□□□□ 0.01
COL7A1-206ENST00000466591 CARM1Q86X55 608 aa15.12■□□□□ 0.01
COL7A1-206ENST00000466591 ZNF786Q8N393 782 aa15.12■□□□□ 0.01
COL7A1-206ENST00000466591 LRRC17Q8N6Y2 441 aa15.12■□□□□ 0.01
COL7A1-206ENST00000466591 PCYOX1LQ8NBM8 494 aa15.12■□□□□ 0.01
COL7A1-206ENST00000466591 SLC30A7Q8NEW0 376 aa15.12■□□□□ 0.01
COL7A1-206ENST00000466591 MRPL37Q9BZE1 423 aaKnown RBP15.12■□□□□ 0.01
COL7A1-206ENST00000466591 OR51B6Q9H340 312 aa15.12■□□□□ 0.01
COL7A1-206ENST00000466591 SLC22A23A1A5C7 686 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 MRASO14807 208 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 DHHO43323 396 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 LCKP06239 509 aa15.11■□□□□ 0.01
COL7A1-206ENST00000466591 ZNF14P17017 642 aaPredicted RBP15.11■□□□□ 0.01
COL7A1-206ENST00000466591 ALDH3B1P43353 468 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms