RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 ARMC7Q9H6L4 198 aa10.02□□□□□ -0.81
CNOT4-208ENST00000465721 TPT1P8Q9HAU6 139 aa10.02□□□□□ -0.81
CNOT4-208ENST00000465721 B3GAT2Q9NPZ5 323 aa10.02□□□□□ -0.81
CNOT4-208ENST00000465721 HINT3Q9NQE9 182 aaKnown RBP10.02□□□□□ -0.81
CNOT4-208ENST00000465721 NKIRAS2Q9NYR9 191 aa10.02□□□□□ -0.81
CNOT4-208ENST00000465721 TAAR3PQ9P1P4 343 aa10.02□□□□□ -0.81
CNOT4-208ENST00000465721 ZNF232Q9UNY5 417 aa10.02□□□□□ -0.81
CNOT4-208ENST00000465721 IFT52Q9Y366 437 aa10.02□□□□□ -0.81
CNOT4-208ENST00000465721 CACNG2Q9Y698 323 aa10.02□□□□□ -0.81
CNOT4-208ENST00000465721 IGHV1-69-2A0A0G2JMI3 117 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 WDR91A4D1P6 747 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 BGLAPP02818 100 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 ZCCHC18P0CG32 403 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 FAM157BP0CG42 384 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 NQO1P15559 274 aaKnown RBP10.01□□□□□ -0.81
CNOT4-208ENST00000465721 GATA3P23771 443 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 LSP1P33241 339 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 SLC1A6P48664 564 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 KLF3P57682 345 aaPredicted RBP10.01□□□□□ -0.81
CNOT4-208ENST00000465721 ERVS71-1P61550 626 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 PCGF3Q3KNV8 242 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 USP51Q70EK9 711 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 NET1Q7Z628 596 aaPredicted RBP10.01□□□□□ -0.81
CNOT4-208ENST00000465721 SKA3Q8IX90 412 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 LRRC17Q8N6Y2 441 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 SCAIQ8N9R8 606 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 OR6N1Q8NGY5 312 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 OR6S1Q8NH40 331 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 C1orf147Q96MC9 270 aaPredicted RBP10.01□□□□□ -0.81
CNOT4-208ENST00000465721 MOGAT1Q96PD6 335 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 C1QTNF5Q9BXJ0 243 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 NTN4Q9HB63 628 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 CACYBPQ9HB71 228 aaKnown RBP10.01□□□□□ -0.81
CNOT4-208ENST00000465721 BCL2L10Q9HD36 194 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 DDX28Q9NUL7 540 aaKnown RBP10.01□□□□□ -0.81
CNOT4-208ENST00000465721 RPS6KB2Q9UBS0 482 aa10.01□□□□□ -0.81
CNOT4-208ENST00000465721 DNAJC9-AS1A6NH13 148 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 CLDN25C9JDP6 229 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 BIRC5O15392 142 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 CSNK1A1P48729 337 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 PUDPQ08623 228 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 ALG10BQ5I7T1 473 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 TMEM154Q6P9G4 183 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 WDR88Q6ZMY6 472 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 DOK3Q7L591 496 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 SNX32Q86XE0 403 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 KIRREL3Q8IZU9 778 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 SIGLECL1Q8N7X8 197 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 GLB1L3Q8NCI6 653 aaPredicted RBP10□□□□□ -0.81
CNOT4-208ENST00000465721 SLC30A7Q8NEW0 376 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 SNX33Q8WV41 574 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 DNAJA4Q8WW22 397 aaPredicted RBP10□□□□□ -0.81
CNOT4-208ENST00000465721 MAL2Q969L2 176 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 OR51B6Q9H340 312 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 C7orf69Q9H7B7 122 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 UNKLQ9H9P5 680 aaKnown RBP10□□□□□ -0.81
CNOT4-208ENST00000465721 A4GALTQ9NPC4 353 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 TCF7L2Q9NQB0 619 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 PNPOQ9NVS9 261 aa10□□□□□ -0.81
CNOT4-208ENST00000465721 THUMPD1Q9NXG2 353 aaKnown RBP10□□□□□ -0.81
CNOT4-208ENST00000465721 MRPL39Q9NYK5 338 aaKnown RBP10□□□□□ -0.81
CNOT4-208ENST00000465721 A0A0G2JK05 382 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 SLC22A23A1A5C7 686 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 LRRN3E7EW58 273 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 SNAP29O95721 258 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 IL6P05231 212 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 BMP2P12643 396 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 CCL2P13500 99 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 HOXB9P17482 250 aaPredicted RBP9.99□□□□□ -0.81
CNOT4-208ENST00000465721 BGNP21810 368 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 PRTN3P24158 256 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 FPR2P25090 351 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 EPHA3P29320 983 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 PRKAR1BP31321 381 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 LCN2P80188 198 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 TEKQ02763 1124 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 GLO1Q04760 184 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 RBBP4Q09028 425 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 MIDNQ504T8 468 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 FAM91A1Q658Y4 838 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 PIWIL3Q7Z3Z3 882 aaKnown RBP9.99□□□□□ -0.81
CNOT4-208ENST00000465721 PXKQ7Z7A4 578 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 SLC22A24Q8N4F4 322 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 DEFB108BQ8NET1 73 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 BBS10Q8TAM1 723 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 ZNF519Q8TB69 540 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 SYNPRQ8TBG9 265 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.99□□□□□ -0.815e-8■■■■■ 65.3
CNOT4-208ENST00000465721 TMEM54Q969K7 222 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 ZBTB18Q99592 522 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 ASPNQ9BXN1 380 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 ROPN1BQ9BZX4 212 aaPredicted RBP9.99□□□□□ -0.81
CNOT4-208ENST00000465721 ZMAT3Q9HA38 289 aaKnown RBP9.99□□□□□ -0.81
CNOT4-208ENST00000465721 SAP30LQ9HAJ7 183 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 ROPN1Q9HAT0 212 aaPredicted RBP9.99□□□□□ -0.81
CNOT4-208ENST00000465721 CDH20Q9HBT6 801 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 TMEM38BQ9NVV0 291 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 SLCO1C1Q9NYB5 712 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 GPR160Q9UJ42 338 aa9.99□□□□□ -0.81
CNOT4-208ENST00000465721 PPIAL4EA0A075B759 164 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms