RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 SLC17A5Q9NRA2 495 aa10.86□□□□□ -0.67
CHPF2-202ENST00000465601 VNN3Q9NY84 501 aa10.86□□□□□ -0.67
CHPF2-202ENST00000465601 GLTPQ9NZD2 209 aa10.86□□□□□ -0.67
CHPF2-202ENST00000465601 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.86□□□□□ -0.67
CHPF2-202ENST00000465601 ZNF346Q9UL40 294 aaKnown RBP10.86□□□□□ -0.67
CHPF2-202ENST00000465601 SIGLEC7Q9Y286 467 aa10.86□□□□□ -0.67
CHPF2-202ENST00000465601 SLC25A15Q9Y619 301 aa10.86□□□□□ -0.67
CHPF2-202ENST00000465601 U3KQV3 271 aa10.86□□□□□ -0.67
CHPF2-202ENST00000465601 USF3Q68DE3 2245 aa10.86□□□□□ -0.67
CHPF2-202ENST00000465601 A0A1W2PPR1 153 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 TRMUO75648 421 aaKnown RBP10.85□□□□□ -0.67
CHPF2-202ENST00000465601 SEC14L2O76054 403 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 GOSR1O95249 250 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 CST1P01037 141 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 IGHG1P01857 330 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 PGA4P0DJD7 388 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 PGA3P0DJD8 388 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 ACADSP16219 412 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 LOXP28300 417 aaPredicted RBP10.85□□□□□ -0.67
CHPF2-202ENST00000465601 RPL4P36578 427 aaKnown RBP10.85□□□□□ -0.67
CHPF2-202ENST00000465601 ACVR1BP36896 505 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 IFNGR2P38484 337 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 CLRN1P58418 232 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 PRPS1P60891 318 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 RPL27P61353 136 aaKnown RBP10.85□□□□□ -0.67
CHPF2-202ENST00000465601 ERVK-25P63136 954 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 MYBPC1Q00872 1141 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 TBRG1Q3YBR2 411 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 BEX5Q5H9J7 111 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 ARMC4Q5T2S8 1044 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 C1orf146Q5VVC0 180 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 LRFN4Q6PJG9 635 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 SEZ6L2Q6UXD5 910 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 SYT14Q8NB59 555 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 OR9Q2Q8NGE9 314 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 GNPDA2Q8TDQ7 276 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 NRGNQ92686 78 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 SLCO4A1Q96BD0 722 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 HS3ST6Q96QI5 342 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 REEP1Q9H902 201 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 NGBQ9NPG2 151 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 IL20RAQ9UHF4 553 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 POFUT2Q9Y2G5 429 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 SAMHD1Q9Y3Z3 626 aaKnown RBP10.85□□□□□ -0.67
CHPF2-202ENST00000465601 CSMD1Q96PZ7 3565 aa10.85□□□□□ -0.67
CHPF2-202ENST00000465601 DPRXA6NFQ7 191 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 ZNF99A8MXY4 864 aaPredicted RBP10.84□□□□□ -0.67
CHPF2-202ENST00000465601 FKBP6O75344 327 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 CCNB2O95067 398 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 NDUFB2O95178 105 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 CD14P08571 375 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 QDPRP09417 244 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 HOXC12P31275 282 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 GSSP48637 474 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 ZNF83P51522 516 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 IST1P53990 364 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 SH3BGRP55822 239 aaPredicted RBP10.84□□□□□ -0.67
CHPF2-202ENST00000465601 TUBA1BP68363 451 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 TUBA4AP68366 448 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 TAF11Q15544 211 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 C1orf94Q6P1W5 598 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 PGBD2Q6P3X8 592 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 ANKRD16Q6P6B7 361 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 THSD4Q6ZMP0 1018 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 TUBA1AQ71U36 451 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 C17orf78Q8N4C9 275 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 HDAC2Q92769 488 aaKnown RBP10.84□□□□□ -0.67
CHPF2-202ENST00000465601 UTP4Q969X6 686 aaKnown RBP10.84□□□□□ -0.67
CHPF2-202ENST00000465601 TSPAN32Q96QS1 320 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 KATNB1Q9BVA0 655 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 MRPL13Q9BYD1 178 aaKnown RBP10.84□□□□□ -0.67
CHPF2-202ENST00000465601 NELFAQ9H3P2 528 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 LIME1Q9H400 295 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 CCM2LQ9NUG4 571 aaPredicted RBP10.84□□□□□ -0.67
CHPF2-202ENST00000465601 NPAP1Q9NZP6 1156 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 AMDHD2Q9Y303 409 aa10.84□□□□□ -0.67
CHPF2-202ENST00000465601 CSMD2Q7Z408 3487 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 NPIPB13A6NJU9 1138 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 NPIPB4C9JG80 1138 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 GNGT2O14610 69 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 DHHO43323 396 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 CIB2O75838 187 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 PLAUP00749 431 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 GASTP01350 101 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 IGHMP01871 453 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 HOXB6P17509 224 aaKnown RBP10.83□□□□□ -0.68
CHPF2-202ENST00000465601 FPR3P25089 353 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 FXYD6P3P58550 94 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 UBE2NP61088 152 aaKnown RBP10.83□□□□□ -0.68
CHPF2-202ENST00000465601 TSPAN31Q12999 210 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 HIST3H3Q16695 136 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 MICAQ29983 383 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 NCMAPQ5T1S8 102 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 ZNF770Q6IQ21 691 aaPredicted RBP10.83□□□□□ -0.68
CHPF2-202ENST00000465601 SMARCD3Q6STE5 483 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 KLHL24Q6TFL4 600 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 ZNF813Q6ZN06 617 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 SSX8Q7RTT4 187 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 HDDC2Q7Z4H3 204 aa10.83□□□□□ -0.68
CHPF2-202ENST00000465601 TMEM179BQ7Z7N9 219 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms