RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 IER3IP1Q9Y5U9 82 aa13.01□□□□□ -0.33
HLA-F-223ENST00000465459 UBR5O95071 2799 aaPredicted RBP13□□□□□ -0.33
HLA-F-223ENST00000465459 MITFO75030 526 aaPredicted RBP13□□□□□ -0.33
HLA-F-223ENST00000465459 CLDN14O95500 239 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 PPP1R3DO95685 299 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 HMGN1P05114 100 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 PGA4P0DJD7 388 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 PGA3P0DJD8 388 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 POU1F1P28069 291 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 PEX2P28328 305 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 NOS3P29474 1203 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 GRK5P34947 590 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 ACVR1BP36896 505 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 CSNK1A1P48729 337 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 ASCL1P50553 236 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 CDK5Q00535 292 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 NPRL3Q12980 569 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 TOP3AQ13472 1001 aaPredicted RBP13□□□□□ -0.33
HLA-F-223ENST00000465459 KRR1Q13601 381 aaKnown RBP13□□□□□ -0.33
HLA-F-223ENST00000465459 MELKQ14680 651 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 P2RY6Q15077 328 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 HIST3H3Q16695 136 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 PGGHGQ32M88 737 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 CLEC12AQ5QGZ9 265 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 TSPO2Q5TGU0 170 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 GPR137CQ8N3F9 429 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 ZNF610Q8N9Z0 462 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 OR6N1Q8NGY5 312 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 TMEM54Q969K7 222 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 Q96M85 177 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 KCNK17Q96T54 332 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 VCXQ9H320 206 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 KCNJ16Q9NPI9 418 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 ASB6Q9NWX5 421 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 UPB1Q9UBR1 384 aa13□□□□□ -0.33
HLA-F-223ENST00000465459 RELNP78509 3460 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 TEX13CA0A0J9YWL9 993 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 EEF1E1-BLOC1S5C9J1V9 151 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 RPL36A-HNRNPH2H7BZ11 118 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 PYCARD-AS1I3L0S3 204 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 EEF1E1O43324 174 aaKnown RBP12.99□□□□□ -0.33
HLA-F-223ENST00000465459 TRMUO75648 421 aaKnown RBP12.99□□□□□ -0.33
HLA-F-223ENST00000465459 KRT33AO76009 404 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 IFNGP01579 166 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 IGFBP1P08833 259 aaPredicted RBP12.99□□□□□ -0.33
HLA-F-223ENST00000465459 ZNF133P52736 654 aaPredicted RBP12.99□□□□□ -0.33
HLA-F-223ENST00000465459 CLRN1P58418 232 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 MYBPC1Q00872 1141 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 ITGADQ13349 1161 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 CAMK2DQ13557 499 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 GINS1Q14691 196 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 PTGES3Q15185 160 aaKnown RBP12.99□□□□□ -0.33
HLA-F-223ENST00000465459 THEM4Q5T1C6 240 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 LPCAT4Q643R3 524 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 GABRG1Q8N1C3 465 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 UBE2J2Q8N2K1 259 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 NOXO1Q8NFA2 376 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 RBP7Q96R05 134 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 PRRG3Q9BZD7 231 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 OPN3Q9H1Y3 402 aaPredicted RBP12.99□□□□□ -0.33
HLA-F-223ENST00000465459 VCX3BQ9H321 246 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 SLC7A10Q9NS82 523 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 GLTPQ9NZD2 209 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 KLHL21Q9UJP4 597 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 DOPEY1Q5JWR5 2465 aa12.99□□□□□ -0.33
HLA-F-223ENST00000465459 SPTBN1Q01082 2364 aaKnown RBP12.99□□□□□ -0.33
HLA-F-223ENST00000465459 FREM1Q5H8C1 2179 aa12.98□□□□□ -0.33
HLA-F-223ENST00000465459 PRSS37A4D1T9 235 aa12.98□□□□□ -0.33
HLA-F-223ENST00000465459 ZAR1LA6NP61 321 aa12.98□□□□□ -0.33
HLA-F-223ENST00000465459 ZNF587BE7ETH6 402 aa12.98□□□□□ -0.33
HLA-F-223ENST00000465459 ARHGEF9O43307 516 aa12.98□□□□□ -0.33
HLA-F-223ENST00000465459 EDNRAP25101 427 aa12.98□□□□□ -0.33
HLA-F-223ENST00000465459 SH3BGRP55822 239 aaPredicted RBP12.98□□□□□ -0.33
HLA-F-223ENST00000465459 RUNX1T1Q06455 604 aa12.98□□□□□ -0.33
HLA-F-223ENST00000465459 LRRC36Q1X8D7 754 aa12.98□□□□□ -0.33
HLA-F-223ENST00000465459 MESTQ5EB52 335 aa12.98□□□□□ -0.33
HLA-F-223ENST00000465459 ZNF474Q6S9Z5 364 aaPredicted RBP12.98□□□□□ -0.33
HLA-F-223ENST00000465459 JAZF1Q86VZ6 243 aa12.98□□□□□ -0.33
HLA-F-223ENST00000465459 OR4Q3Q8NH05 313 aa12.98□□□□□ -0.33
HLA-F-223ENST00000465459 SSC4DQ8WTU2 575 aa12.98□□□□□ -0.33
HLA-F-223ENST00000465459 HDAC2Q92769 488 aaKnown RBP12.98□□□□□ -0.33
HLA-F-223ENST00000465459 NMD3Q96D46 503 aaKnown RBP12.98□□□□□ -0.33
HLA-F-223ENST00000465459 USB1Q9BQ65 265 aaKnown RBP12.98□□□□□ -0.33
HLA-F-223ENST00000465459 HDHD5Q9BXW7 423 aa12.98□□□□□ -0.33
HLA-F-223ENST00000465459 RASSF4Q9H2L5 321 aa12.98□□□□□ -0.33
HLA-F-223ENST00000465459 CMC2Q9NRP2 79 aa12.98□□□□□ -0.33
HLA-F-223ENST00000465459 SMPD3Q9NY59 655 aaPredicted RBP12.98□□□□□ -0.33
HLA-F-223ENST00000465459 VSX1Q9NZR4 365 aaPredicted RBP12.98□□□□□ -0.33
HLA-F-223ENST00000465459 PRSS50Q9UI38 385 aa12.98□□□□□ -0.33
HLA-F-223ENST00000465459 SLC22A23A1A5C7 686 aa12.97□□□□□ -0.33
HLA-F-223ENST00000465459 RIIAD1A6NNX1 92 aa12.97□□□□□ -0.33
HLA-F-223ENST00000465459 H0YJX3 145 aa12.97□□□□□ -0.33
HLA-F-223ENST00000465459 UPK3AO75631 287 aa12.97□□□□□ -0.33
HLA-F-223ENST00000465459 HIST1H1CP16403 213 aaKnown RBP12.97□□□□□ -0.33
HLA-F-223ENST00000465459 PSMB1P20618 241 aaKnown RBP12.97□□□□□ -0.33
HLA-F-223ENST00000465459 COX5AP20674 150 aa12.97□□□□□ -0.33
HLA-F-223ENST00000465459 MPGP29372 298 aa12.97□□□□□ -0.33
HLA-F-223ENST00000465459 CD79BP40259 229 aa12.97□□□□□ -0.33
HLA-F-223ENST00000465459 TGFBR3Q03167 851 aa12.97□□□□□ -0.33
HLA-F-223ENST00000465459 SRSF1Q07955 248 aaKnown RBP eCLIP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms