RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 UFSP2Q9NUQ7 469 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 CD300AQ9UGN4 299 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 TP53TG5Q9Y2B4 290 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 NOTCH2Q04721 2471 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 ARHGAP21Q5T5U3 1957 aa3.62□□□□□ -1.83
PTCD3-205ENST00000464541 AKNAQ7Z591 1439 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-205ENST00000464541 IGHV3-64DA0A0J9YX35 117 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 A0A1B0GUS0 222 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 A6NIZ1 184 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 SNTNA6NMZ2 147 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 DCTN6O00399 190 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 TIMM8AO60220 97 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-205ENST00000464541 N4BP1O75113 896 aaKnown RBP3.61□□□□□ -1.83
PTCD3-205ENST00000464541 MBP02144 154 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 FTH1P02794 183 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 CHTF8P0CG12 524 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 POLR2EP19388 210 aaKnown RBP3.61□□□□□ -1.83
PTCD3-205ENST00000464541 SHMT2P34897 504 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 ATP5C1P36542 298 aaKnown RBP3.61□□□□□ -1.83
PTCD3-205ENST00000464541 SPAM1P38567 509 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 MAGEA8P43361 318 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 CCT3P49368 545 aaKnown RBP3.61□□□□□ -1.83
PTCD3-205ENST00000464541 BCAP31P51572 246 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 RAP1BP61224 184 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 TGFBR3Q03167 851 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 LIPEQ05469 1076 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 ASPHQ12797 758 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 GPNMBQ14956 572 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 USF2Q15853 346 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-205ENST00000464541 HIKESHIQ53FT3 197 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 GPRC6AQ5T6X5 926 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 PYHIN1Q6K0P9 492 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 RNASEKQ6P5S7 137 aaKnown RBP3.61□□□□□ -1.83
PTCD3-205ENST00000464541 UTS2BQ765I0 119 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 LINC00523Q86TU6 105 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 C6orf223Q8N319 242 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 GPX8Q8TED1 209 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 SLC38A4Q969I6 547 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 C8orf76Q96K31 380 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 AMDHD1Q96NU7 426 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 KCNS3Q9BQ31 491 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 IL22Q9GZX6 179 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 MCCC2Q9HCC0 563 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 SLC17A5Q9NRA2 495 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 CYTL1Q9NRR1 136 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 QPCTLQ9NXS2 382 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 PDP1Q9P0J1 537 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-205ENST00000464541 COPS3Q9UNS2 423 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 PHLPP2Q6ZVD8 1323 aa3.61□□□□□ -1.83
PTCD3-205ENST00000464541 COL4A4P53420 1690 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-205ENST00000464541 PPIAL4EA0A075B759 164 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 TRAV25A0A0B4J276 109 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 HIP1O00291 1037 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 PPIAL4FP0DN26 164 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 IMPDH1P20839 514 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 OTX1P32242 354 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-205ENST00000464541 GLP1RP43220 463 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 P2RY1P47900 373 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 BLVRAP53004 296 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 YWHAEP62258 255 aaKnown RBP3.6□□□□□ -1.83
PTCD3-205ENST00000464541 PARP15Q460N3 678 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 TP53I3Q53FA7 332 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 C6orf226Q5I0X4 101 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 KCNIP4Q6PIL6 250 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 TMEM107Q6UX40 140 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 LINC00469Q8N7U9 141 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 CATSPER1Q8NEC5 780 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 TRPV1Q8NER1 839 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 LRRC20Q8TCA0 184 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 DDI1Q8WTU0 396 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 PDCD6IPQ8WUM4 868 aaKnown RBP3.6□□□□□ -1.83
PTCD3-205ENST00000464541 ASZ1Q8WWH4 475 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 KIAA1143Q96AT1 154 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-205ENST00000464541 TMIGD2Q96BF3 282 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 RNF185Q96GF1 192 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 PAGE5Q96GU1 130 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 TGM7Q96PF1 710 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 TRNT1Q96Q11 434 aaKnown RBP3.6□□□□□ -1.83
PTCD3-205ENST00000464541 PANX1Q96RD7 426 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 PATZ1Q9HBE1 687 aaKnown RBP3.6□□□□□ -1.83
PTCD3-205ENST00000464541 SPACA1Q9HBV2 294 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 EML4Q9HC35 981 aaKnown RBP3.6□□□□□ -1.83
PTCD3-205ENST00000464541 TREM1Q9NP99 234 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 C20orf96Q9NUD7 363 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-205ENST00000464541 ADAM28Q9UKQ2 775 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 KIF27Q86VH2 1401 aa3.6□□□□□ -1.83
PTCD3-205ENST00000464541 IGKV2D-24A0A075B6R9 120 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 IGKV1D-8A0A087WSZ0 117 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 A0A1B0GVL5 298 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 IDSB3KWA1 339 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 F5H6K3 240 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 AGPAT2O15120 278 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 UPK3AO75631 287 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 CRTAPO75718 401 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-205ENST00000464541 WISP3O95389 354 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-205ENST00000464541 TGM6O95932 706 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 EIF2S2P20042 333 aaKnown RBP3.59□□□□□ -1.83
PTCD3-205ENST00000464541 ATP6V1B2P21281 511 aa3.59□□□□□ -1.83
PTCD3-205ENST00000464541 MAP3K8P41279 467 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms