RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ZER1Q7Z7L7 766 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 TMEM123Q8N131 208 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 ANKK1Q8NFD2 765 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 NRBF2Q96F24 287 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 BDH2Q9BUT1 245 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 ESRP2Q9H6T0 727 aaKnown RBP14.94□□□□□ -0.02
VPS52-215ENST00000464425 NTN4Q9HB63 628 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 SLC17A5Q9NRA2 495 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 NPAP1Q9NZP6 1156 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 EDARQ9UNE0 448 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 SLC25A15Q9Y619 301 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 U3KQV3 271 aa14.94□□□□□ -0.02
VPS52-215ENST00000464425 A0A096LPE4 126 aa14.93□□□□□ -0.02
VPS52-215ENST00000464425 A0A1W2PPZ6 126 aa14.93□□□□□ -0.02
VPS52-215ENST00000464425 ARRDC5A6NEK1 342 aa14.93□□□□□ -0.02
VPS52-215ENST00000464425 H3BNX3 289 aa14.93□□□□□ -0.02
VPS52-215ENST00000464425 RAF1P04049 648 aa14.93□□□□□ -0.02
VPS52-215ENST00000464425 CD3EP07766 207 aa14.93□□□□□ -0.02
VPS52-215ENST00000464425 SAGP10523 405 aaPredicted RBP14.93□□□□□ -0.02
VPS52-215ENST00000464425 AQP2P41181 271 aa14.93□□□□□ -0.02
VPS52-215ENST00000464425 ZNF83P51522 516 aa14.93□□□□□ -0.02
VPS52-215ENST00000464425 ARHGDIAP52565 204 aa14.93□□□□□ -0.02
VPS52-215ENST00000464425 BIDP55957 195 aa14.93□□□□□ -0.02
VPS52-215ENST00000464425 RPL18Q07020 188 aaKnown RBP14.93□□□□□ -0.02
VPS52-215ENST00000464425 BSPH1Q075Z2 132 aa14.93□□□□□ -0.02
VPS52-215ENST00000464425 SLC35D2Q76EJ3 337 aa14.93□□□□□ -0.02
VPS52-215ENST00000464425 OAFQ86UD1 273 aa14.93□□□□□ -0.02
VPS52-215ENST00000464425 C20orf196Q8IYI0 205 aa14.93□□□□□ -0.02
VPS52-215ENST00000464425 C1orf162Q8NEQ5 155 aaPredicted RBP14.93□□□□□ -0.02
VPS52-215ENST00000464425 OR1K1Q8NGR3 316 aa14.93□□□□□ -0.02
VPS52-215ENST00000464425 ZNF837Q96EG3 531 aaPredicted RBP14.93□□□□□ -0.02
VPS52-215ENST00000464425 FAM46AQ96IP4 442 aaKnown RBP14.93□□□□□ -0.02
VPS52-215ENST00000464425 GPR35Q9HC97 309 aa14.93□□□□□ -0.02
VPS52-215ENST00000464425 S100A14Q9HCY8 104 aa14.93□□□□□ -0.02
VPS52-215ENST00000464425 HIF3AQ9Y2N7 669 aa14.93□□□□□ -0.02
VPS52-215ENST00000464425 CADP27708 2225 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 CDC42EP2O14613 210 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 PTP4A3O75365 173 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 E2F6O75461 281 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 ATE1O95260 518 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 F13BP05160 661 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 FPR3P25089 353 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 HOXC12P31275 282 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 GPR4P46093 362 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 RPS4XP62701 263 aaKnown RBP14.92□□□□□ -0.02
VPS52-215ENST00000464425 ARF1P84077 181 aaKnown RBP14.92□□□□□ -0.02
VPS52-215ENST00000464425 PPP1R8Q12972 351 aaKnown RBP14.92□□□□□ -0.02
VPS52-215ENST00000464425 FHL1Q13642 323 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 LAPTM4AQ15012 233 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 ACKR1Q16570 336 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 PGBD2Q6P3X8 592 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 SHQ1Q6PI26 577 aaKnown RBP14.92□□□□□ -0.02
VPS52-215ENST00000464425 SSX8Q7RTT4 187 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 TMEM179BQ7Z7N9 219 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 C17orf78Q8N4C9 275 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 OR6N1Q8NGY5 312 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 MOSPD2Q8NHP6 518 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 GNPDA2Q8TDQ7 276 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 GIPC3Q8TF64 312 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 LRTOMTQ8WZ04 291 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 BCL2L2Q92843 193 aaPredicted RBP14.92□□□□□ -0.02
VPS52-215ENST00000464425 NINJ1Q92982 152 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 STMN2Q93045 179 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 CENPNQ96H22 339 aaPredicted RBP14.92□□□□□ -0.02
VPS52-215ENST00000464425 TMEM204Q9BSN7 226 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 CRLF2Q9HC73 371 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 RNF115Q9Y4L5 304 aa14.92□□□□□ -0.02
VPS52-215ENST00000464425 RPL36A-HNRNPH2H7BZ11 118 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 M0R1B8 84 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 GASTP01350 101 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 GSSP48637 474 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 ART1P52961 327 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 PRPS1P60891 318 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 TSPAN31Q12999 210 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 MELKQ14680 651 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 CEACAM16Q2WEN9 425 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 TBRG1Q3YBR2 411 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 ZBED5Q49AG3 693 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 ADAM5Q6NVV9 412 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 KLHL17Q6TDP4 642 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 KLHL24Q6TFL4 600 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 AKAP1Q92667 903 aaKnown RBP eCLIP14.91□□□□□ -0.02
VPS52-215ENST00000464425 NEUROG1Q92886 237 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 GPA33Q99795 319 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 DGCR6LQ9BY27 220 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 MGAT4BQ9UQ53 548 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 AMDHD2Q9Y303 409 aa14.91□□□□□ -0.02
VPS52-215ENST00000464425 AKAP9Q99996 3911 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 A0A1W2PRG6 482 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 UNC119BA6NIH7 251 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 SEC14L2O76054 403 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 BCL10O95999 233 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 CD53P19397 219 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 CSNK1A1P48729 337 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 UBE2NP61088 152 aaKnown RBP14.9□□□□□ -0.02
VPS52-215ENST00000464425 TUBA1BP68363 451 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 TUBA4AP68366 448 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 TAF11Q15544 211 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 ANKRD16Q6P6B7 361 aa14.9□□□□□ -0.02
VPS52-215ENST00000464425 CD300LDQ6UXZ3 194 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms