RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 TACSTD2P09758 323 aa12.48□□□□□ -0.41
ALMS1-202ENST00000464408 CRYBA2P53672 197 aa12.48□□□□□ -0.41
ALMS1-202ENST00000464408 RAB1AP62820 205 aa12.48□□□□□ -0.41
ALMS1-202ENST00000464408 CCNIQ14094 377 aa12.48□□□□□ -0.41
ALMS1-202ENST00000464408 RAB39AQ14964 217 aa12.48□□□□□ -0.41
ALMS1-202ENST00000464408 ZNF74Q16587 644 aa12.48□□□□□ -0.41
ALMS1-202ENST00000464408 SWT1Q5T5J6 900 aaKnown RBP12.48□□□□□ -0.41
ALMS1-202ENST00000464408 ZNF613Q6PF04 617 aa12.48□□□□□ -0.41
ALMS1-202ENST00000464408 SKA3Q8IX90 412 aa12.48□□□□□ -0.41
ALMS1-202ENST00000464408 ZNF786Q8N393 782 aa12.48□□□□□ -0.41
ALMS1-202ENST00000464408 C11orf65Q8NCR3 313 aa12.48□□□□□ -0.41
ALMS1-202ENST00000464408 BHLHE22Q8NFJ8 381 aaPredicted RBP12.48□□□□□ -0.41
ALMS1-202ENST00000464408 UBASH3BQ8TF42 649 aa12.48□□□□□ -0.41
ALMS1-202ENST00000464408 DYDC1Q8WWB3 177 aa12.48□□□□□ -0.41
ALMS1-202ENST00000464408 TMEM54Q969K7 222 aa12.48□□□□□ -0.41
ALMS1-202ENST00000464408 MRPL24Q96A35 216 aaKnown RBP12.48□□□□□ -0.41
ALMS1-202ENST00000464408 C19orf24Q9BVV8 132 aa12.48□□□□□ -0.41
ALMS1-202ENST00000464408 TAS2R5Q9NYW4 299 aa12.48□□□□□ -0.41
ALMS1-202ENST00000464408 NDUFAF1Q9Y375 327 aa12.48□□□□□ -0.41
ALMS1-202ENST00000464408 NBEAL1Q6ZS30 2694 aa12.48□□□□□ -0.41
ALMS1-202ENST00000464408 FMO6PO60774 539 aa12.47□□□□□ -0.41
ALMS1-202ENST00000464408 RAB36O95755 333 aa12.47□□□□□ -0.41
ALMS1-202ENST00000464408 MT-ATP6P00846 226 aa12.47□□□□□ -0.41
ALMS1-202ENST00000464408 HPXP02790 462 aa12.47□□□□□ -0.41
ALMS1-202ENST00000464408 APEX1P27695 318 aaKnown RBP12.47□□□□□ -0.41
ALMS1-202ENST00000464408 CHN2P52757 468 aa12.47□□□□□ -0.41
ALMS1-202ENST00000464408 FXNQ16595 210 aa12.47□□□□□ -0.41
ALMS1-202ENST00000464408 ELFN2Q5R3F8 820 aa12.47□□□□□ -0.41
ALMS1-202ENST00000464408 LRFN4Q6PJG9 635 aa12.47□□□□□ -0.41
ALMS1-202ENST00000464408 SLC35D2Q76EJ3 337 aa12.47□□□□□ -0.41
ALMS1-202ENST00000464408 PAQR4Q8N4S7 273 aaPredicted RBP12.47□□□□□ -0.41
ALMS1-202ENST00000464408 DPP10Q8N608 796 aa12.47□□□□□ -0.41
ALMS1-202ENST00000464408 ZNF540Q8NDQ6 660 aa12.47□□□□□ -0.41
ALMS1-202ENST00000464408 IL17RDQ8NFM7 739 aa12.47□□□□□ -0.41
ALMS1-202ENST00000464408 ADAMTS16Q8TE57 1224 aa12.47□□□□□ -0.41
ALMS1-202ENST00000464408 SH3GL3Q99963 347 aa12.47□□□□□ -0.41
ALMS1-202ENST00000464408 KAT8Q9H7Z6 458 aaKnown RBP12.47□□□□□ -0.41
ALMS1-202ENST00000464408 GLTPQ9NZD2 209 aa12.47□□□□□ -0.41
ALMS1-202ENST00000464408 REV1Q9UBZ9 1251 aa12.47□□□□□ -0.41
ALMS1-202ENST00000464408 SLC7A7Q9UM01 511 aa12.47□□□□□ -0.41
ALMS1-202ENST00000464408 VSTM5A8MXK1 200 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 M0R233 179 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 ANGPT2O15123 496 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 RNF13O43567 381 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 NCR1O76036 304 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 C8BP07358 591 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 ERCC1P07992 297 aaPredicted RBP12.46□□□□□ -0.41
ALMS1-202ENST00000464408 CCL2P13500 99 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 TNFRSF1BP20333 461 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 COL8A2P25067 703 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 PCGF2P35227 344 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 GLRXP35754 106 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 GZMMP51124 257 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 RBBP4Q09028 425 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 NFYCQ13952 458 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 TRMT5Q32P41 509 aaKnown RBP12.46□□□□□ -0.41
ALMS1-202ENST00000464408 ALKBH6Q3KRA9 238 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 OR10A6Q8NH74 314 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 OR6X1Q8NH79 312 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 YIPF5Q969M3 257 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 C1orf159Q96HA4 380 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 PRSS27Q9BQR3 290 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 NARFLQ9H6Q4 476 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 NPHS2Q9NP85 383 aa12.46□□□□□ -0.41
ALMS1-202ENST00000464408 INTS9Q9NV88 658 aaKnown RBP12.46□□□□□ -0.41
ALMS1-202ENST00000464408 FBXO9Q9UK97 447 aaPredicted RBP12.46□□□□□ -0.41
ALMS1-202ENST00000464408 TRAPPC13A5PLN9 417 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 FBP2O00757 339 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 WNT9BO14905 357 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 SYNGR3O43761 229 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 SHOX2O60902 331 aaPredicted RBP12.45□□□□□ -0.42
ALMS1-202ENST00000464408 UBL3O95164 117 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 OR6A2O95222 327 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 FAM157BP0CG42 384 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 NAT2P11245 290 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 HNF1AP20823 631 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 THBS2P35442 1172 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 CDH15P55291 814 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 ERVS71-1P61550 626 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 MYBPC1Q00872 1141 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 RUNX1T1Q06455 604 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 ZP4Q12836 540 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 GKAP1Q5VSY0 366 aaPredicted RBP12.45□□□□□ -0.42
ALMS1-202ENST00000464408 TTC33Q6PID6 262 aaPredicted RBP12.45□□□□□ -0.42
ALMS1-202ENST00000464408 SLC22A24Q8N4F4 322 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 LINC01356Q8N9X3 169 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 PFN4Q8NHR9 129 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 ZNF426Q9BUY5 554 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 OR51B6Q9H340 312 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 RABEP2Q9H5N1 569 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 EVA1AQ9H8M9 152 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 MEPEQ9NQ76 525 aaPredicted RBP12.45□□□□□ -0.42
ALMS1-202ENST00000464408 NANSQ9NR45 359 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 TMEM38BQ9NVV0 291 aa12.45□□□□□ -0.42
ALMS1-202ENST00000464408 CLPTM1O96005 669 aa12.44□□□□□ -0.42
ALMS1-202ENST00000464408 ASAH2BP0C7U1 165 aa12.44□□□□□ -0.42
ALMS1-202ENST00000464408 PGA4P0DJD7 388 aa12.44□□□□□ -0.42
ALMS1-202ENST00000464408 PGA3P0DJD8 388 aa12.44□□□□□ -0.42
ALMS1-202ENST00000464408 EVX1P49640 407 aa12.44□□□□□ -0.42
ALMS1-202ENST00000464408 GALK2Q01415 458 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms