RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 C1orf94Q6P1W5 598 aa13.49□□□□□ -0.25
RAB11FIP3-208ENST00000464263 ANKRD16Q6P6B7 361 aa13.49□□□□□ -0.25
RAB11FIP3-208ENST00000464263 IGFN1Q86VF2 1251 aa13.49□□□□□ -0.25
RAB11FIP3-208ENST00000464263 SPATA24Q86W54 205 aa13.49□□□□□ -0.25
RAB11FIP3-208ENST00000464263 PAPD5Q8NDF8 572 aaKnown RBP13.49□□□□□ -0.25
RAB11FIP3-208ENST00000464263 NRGNQ92686 78 aa13.49□□□□□ -0.25
RAB11FIP3-208ENST00000464263 ZNF566Q969W8 418 aa13.49□□□□□ -0.25
RAB11FIP3-208ENST00000464263 NGBQ9NPG2 151 aa13.49□□□□□ -0.25
RAB11FIP3-208ENST00000464263 B3GAT2Q9NPZ5 323 aa13.49□□□□□ -0.25
RAB11FIP3-208ENST00000464263 VNN3Q9NY84 501 aa13.49□□□□□ -0.25
RAB11FIP3-208ENST00000464263 NPAP1Q9NZP6 1156 aa13.49□□□□□ -0.25
RAB11FIP3-208ENST00000464263 ZNF346Q9UL40 294 aaKnown RBP13.49□□□□□ -0.25
RAB11FIP3-208ENST00000464263 TMCC3Q9ULS5 477 aa13.49□□□□□ -0.25
RAB11FIP3-208ENST00000464263 AURKCQ9UQB9 309 aa13.49□□□□□ -0.25
RAB11FIP3-208ENST00000464263 RAI1Q7Z5J4 1906 aaPredicted RBP13.49□□□□□ -0.25
RAB11FIP3-208ENST00000464263 UNC119BA6NIH7 251 aa13.48□□□□□ -0.25
RAB11FIP3-208ENST00000464263 CENPBD1B2RD01 187 aa13.48□□□□□ -0.25
RAB11FIP3-208ENST00000464263 MCIDASD6RGH6 385 aa13.48□□□□□ -0.25
RAB11FIP3-208ENST00000464263 OR10H3O60404 316 aa13.48□□□□□ -0.25
RAB11FIP3-208ENST00000464263 IGHG1P01857 330 aa13.48□□□□□ -0.25
RAB11FIP3-208ENST00000464263 GSSP48637 474 aa13.48□□□□□ -0.25
RAB11FIP3-208ENST00000464263 NR1H2P55055 460 aa13.48□□□□□ -0.25
RAB11FIP3-208ENST00000464263 PPP1R8Q12972 351 aaKnown RBP13.48□□□□□ -0.25
RAB11FIP3-208ENST00000464263 ZNF770Q6IQ21 691 aaPredicted RBP13.48□□□□□ -0.25
RAB11FIP3-208ENST00000464263 ZNF627Q7L945 461 aa13.48□□□□□ -0.25
RAB11FIP3-208ENST00000464263 SLCO4A1Q96BD0 722 aa13.48□□□□□ -0.25
RAB11FIP3-208ENST00000464263 TMEM204Q9BSN7 226 aa13.48□□□□□ -0.25
RAB11FIP3-208ENST00000464263 ULBP2Q9BZM5 246 aa13.48□□□□□ -0.25
RAB11FIP3-208ENST00000464263 LIME1Q9H400 295 aa13.48□□□□□ -0.25
RAB11FIP3-208ENST00000464263 KRCC1Q9NPI7 259 aaPredicted RBP13.48□□□□□ -0.25
RAB11FIP3-208ENST00000464263 AMDHD2Q9Y303 409 aa13.48□□□□□ -0.25
RAB11FIP3-208ENST00000464263 CSMD2Q7Z408 3487 aa13.48□□□□□ -0.25
RAB11FIP3-208ENST00000464263 A0A096LPE4 126 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 ARPC4-TTLL3A0A0A6YYG9 625 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 A0A1W2PPZ6 126 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 EBAG9O00559 213 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 PLAUP00749 431 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 CD14P08571 375 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 QDPRP09417 244 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 HOXB6P17509 224 aaKnown RBP13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 FPR3P25089 353 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 IFNGR2P38484 337 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 ZNF133P52736 654 aaPredicted RBP13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 CLRN1P58418 232 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 ERVK-25P63136 954 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 PGBD2Q6P3X8 592 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 THSD4Q6ZMP0 1018 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 CCDC121Q6ZUS5 278 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 FAM122BQ7Z309 247 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 HDDC2Q7Z4H3 204 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 LINC00471Q8N535 108 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 SYT14Q8NB59 555 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 ZNF519Q8TB69 540 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 GNPDA2Q8TDQ7 276 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 HDAC2Q92769 488 aaKnown RBP13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 MCHR2Q969V1 340 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 NMD3Q96D46 503 aaKnown RBP13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 RSRC1Q96IZ7 334 aaKnown RBP13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 TSPAN32Q96QS1 320 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 KCNK17Q96T54 332 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 KATNB1Q9BVA0 655 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 C1QTNF6Q9BXI9 259 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 ESRP2Q9H6T0 727 aaKnown RBP13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 OBP2BQ9NPH6 170 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 CCM2LQ9NUG4 571 aaPredicted RBP13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 STX18Q9P2W9 335 aaKnown RBP13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 CADP27708 2225 aa13.47□□□□□ -0.25
RAB11FIP3-208ENST00000464263 DHHO43323 396 aa13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 NDUFB2O95178 105 aa13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 WNT11O96014 354 aa13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 CST1P01037 141 aa13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 GASTP01350 101 aa13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 RPL4P36578 427 aaKnown RBP13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 ACVR1BP36896 505 aa13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 ERFP50548 548 aa13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 ZNF83P51522 516 aa13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 BSPH1Q075Z2 132 aa13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 TSPAN31Q12999 210 aa13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 TOP3AQ13472 1001 aaPredicted RBP13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 ARIH2OSQ8N7S6 290 aa13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 NOXO1Q8NFA2 376 aa13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 LILRB1Q8NHL6 650 aaPredicted RBP13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 UTP4Q969X6 686 aaKnown RBP13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 GPX7Q96SL4 187 aaPredicted RBP13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 FOXB1Q99853 325 aa13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 REEP1Q9H902 201 aa13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 NRIP3Q9NQ35 241 aa13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 POFUT2Q9Y2G5 429 aa13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 ADAM18Q9Y3Q7 739 aa13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 SAMHD1Q9Y3Z3 626 aaKnown RBP13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 U3KQV3 271 aa13.46□□□□□ -0.25
RAB11FIP3-208ENST00000464263 ZNF503-AS2A6NEH8 195 aa13.45□□□□□ -0.26
RAB11FIP3-208ENST00000464263 A6NIZ1 184 aa13.45□□□□□ -0.26
RAB11FIP3-208ENST00000464263 FKBP6O75344 327 aa13.45□□□□□ -0.26
RAB11FIP3-208ENST00000464263 SEC14L2O76054 403 aa13.45□□□□□ -0.26
RAB11FIP3-208ENST00000464263 CCNB2O95067 398 aa13.45□□□□□ -0.26
RAB11FIP3-208ENST00000464263 PAX7P23759 505 aa13.45□□□□□ -0.26
RAB11FIP3-208ENST00000464263 HOXC12P31275 282 aa13.45□□□□□ -0.26
RAB11FIP3-208ENST00000464263 RAP1BP61224 184 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms