RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 SKA3Q8IX90 412 aa11.3□□□□□ -0.6
CTDSP1-206ENST00000464255 OR6N1Q8NGY5 312 aa11.3□□□□□ -0.6
CTDSP1-206ENST00000464255 PFN4Q8NHR9 129 aa11.3□□□□□ -0.6
CTDSP1-206ENST00000464255 SLC26A7Q8TE54 656 aa11.3□□□□□ -0.6
CTDSP1-206ENST00000464255 TMEM255BQ8WV15 326 aa11.3□□□□□ -0.6
CTDSP1-206ENST00000464255 RASSF5Q8WWW0 418 aa11.3□□□□□ -0.6
CTDSP1-206ENST00000464255 LIPHQ8WWY8 451 aa11.3□□□□□ -0.6
CTDSP1-206ENST00000464255 PROX1Q92786 737 aa11.3□□□□□ -0.6
CTDSP1-206ENST00000464255 FOXB1Q99853 325 aa11.3□□□□□ -0.6
CTDSP1-206ENST00000464255 KCNS3Q9BQ31 491 aa11.3□□□□□ -0.6
CTDSP1-206ENST00000464255 MRPL13Q9BYD1 178 aaKnown RBP11.3□□□□□ -0.6
CTDSP1-206ENST00000464255 ULBP2Q9BZM5 246 aa11.3□□□□□ -0.6
CTDSP1-206ENST00000464255 YAE1D1Q9NRH1 226 aa11.3□□□□□ -0.6
CTDSP1-206ENST00000464255 RIMS3Q9UJD0 308 aa11.3□□□□□ -0.6
CTDSP1-206ENST00000464255 POFUT2Q9Y2G5 429 aa11.3□□□□□ -0.6
CTDSP1-206ENST00000464255 RNF13O43567 381 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 OR5F1O95221 314 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 IGF2P01344 180 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 MT-ND1P03886 318 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 PGA4P0DJD7 388 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 PGA3P0DJD8 388 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 NPR2P20594 1047 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 CAPZA2P47755 286 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 GIPRP48546 466 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 CSNK1A1P48729 337 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 PPOXP50336 477 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 SNRPD2P62316 118 aaKnown RBP11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 MELKQ14680 651 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 GSG1Q2KHT4 349 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 MMEL1Q495T6 779 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 C6orf52Q5T4I8 152 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 C8orf82Q6P1X6 216 aaPredicted RBP11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 ERICH5Q6P6B1 374 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 HIPK1Q86Z02 1210 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 SLC15A3Q8IY34 581 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 SVOPLQ8N434 492 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 POU5F2Q8N7G0 328 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 IL17RDQ8NFM7 739 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 RCN3Q96D15 328 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 NMD3Q96D46 503 aaKnown RBP11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 SLC25A44Q96H78 314 aaPredicted RBP11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 FOXN4Q96NZ1 517 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 B3GAT2Q9NPZ5 323 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 MRGBPQ9NV56 204 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 BAG5Q9UL15 447 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 A4GNTQ9UNA3 340 aa11.29□□□□□ -0.6
CTDSP1-206ENST00000464255 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.29□□□□□ -0.65e-8■■■■□ 25.6
CTDSP1-206ENST00000464255 FAM220BPB1ANY3 271 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 hCG_2039718K7EN88 272 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 FFAR1O14842 300 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 SLC22A2O15244 555 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 OR7A10O76100 309 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 OR6A2O95222 327 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 TP53P04637 393 aaPredicted RBP11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 CSF3P09919 207 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 IGHV4-31P0DP07 118 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 CD79AP11912 226 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 FUT1P19526 365 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 USF1P22415 310 aaPredicted RBP11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 AQP2P41181 271 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 RBM34P42696 430 aaKnown RBP11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 NR4A2P43354 598 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 RAB1AP62820 205 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 RPL18Q07020 188 aaKnown RBP11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 FHL1Q13642 323 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 DAG1Q14118 895 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 MAPRE2Q15555 327 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 FXNQ16595 210 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 DEF8Q6ZN54 512 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 PIWIL3Q7Z3Z3 882 aaKnown RBP11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 MICU2Q8IYU8 434 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 CDK20Q8IZL9 346 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 SLC22A24Q8N4F4 322 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 MOSPD2Q8NHP6 518 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 ZNF566Q969W8 418 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 VRK1Q99986 396 aaPredicted RBP11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 POLR2J2Q9GZM3 115 aaKnown RBP11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 POLR2J3Q9H1A7 115 aaKnown RBP11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 TMEM38BQ9NVV0 291 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 GID8Q9NWU2 228 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 SNX13Q9Y5W8 968 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 CAPN7Q9Y6W3 813 aa11.28□□□□□ -0.6
CTDSP1-206ENST00000464255 IGHV4-61A0A0C4DH41 118 aa11.27□□□□□ -0.61
CTDSP1-206ENST00000464255 A8MV72 311 aaPredicted RBP11.27□□□□□ -0.61
CTDSP1-206ENST00000464255 BLOC1S5-TXNDC5H3BN57 136 aa11.27□□□□□ -0.61
CTDSP1-206ENST00000464255 DHHO43323 396 aa11.27□□□□□ -0.61
CTDSP1-206ENST00000464255 HIST1H2ABP04908 130 aa11.27□□□□□ -0.61
CTDSP1-206ENST00000464255 F13BP05160 661 aa11.27□□□□□ -0.61
CTDSP1-206ENST00000464255 QDPRP09417 244 aa11.27□□□□□ -0.61
CTDSP1-206ENST00000464255 THRBP10828 461 aa11.27□□□□□ -0.61
CTDSP1-206ENST00000464255 MDH1P40925 334 aaKnown RBP11.27□□□□□ -0.61
CTDSP1-206ENST00000464255 PTDSS1P48651 473 aaKnown RBP11.27□□□□□ -0.61
CTDSP1-206ENST00000464255 PDLIM4P50479 330 aa11.27□□□□□ -0.61
CTDSP1-206ENST00000464255 ZNF133P52736 654 aaPredicted RBP11.27□□□□□ -0.61
CTDSP1-206ENST00000464255 TAS2R41P59536 307 aa11.27□□□□□ -0.61
CTDSP1-206ENST00000464255 SELENOWP63302 87 aa11.27□□□□□ -0.61
CTDSP1-206ENST00000464255 SNTB2Q13425 540 aaKnown RBP11.27□□□□□ -0.61
CTDSP1-206ENST00000464255 RAB39AQ14964 217 aa11.27□□□□□ -0.61
CTDSP1-206ENST00000464255 LAPTM4AQ15012 233 aa11.27□□□□□ -0.61
CTDSP1-206ENST00000464255 ARMC4Q5T2S8 1044 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms