RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 WDR88Q6ZMY6 472 aa19.38■□□□□ 0.69
USP4-208ENST00000464168 PIWIL3Q7Z3Z3 882 aaKnown RBP19.38■□□□□ 0.69
USP4-208ENST00000464168 C10orf53Q8N6V4 93 aa19.38■□□□□ 0.69
USP4-208ENST00000464168 LRRC37BQ96QE4 947 aa19.38■□□□□ 0.69
USP4-208ENST00000464168 VAPAQ9P0L0 249 aa19.38■□□□□ 0.69
USP4-208ENST00000464168 FBXL3Q9UKT7 428 aa19.38■□□□□ 0.69
USP4-208ENST00000464168 RAB21Q9UL25 225 aa19.38■□□□□ 0.69
USP4-208ENST00000464168 GMEB1Q9Y692 573 aa19.38■□□□□ 0.69
USP4-208ENST00000464168 PRORSD1PA6NEY8 169 aa19.37■□□□□ 0.69
USP4-208ENST00000464168 PPIHO43447 177 aaKnown RBP19.37■□□□□ 0.69
USP4-208ENST00000464168 SERPINI2O75830 405 aa19.37■□□□□ 0.69
USP4-208ENST00000464168 CSNK1A1P48729 337 aa19.37■□□□□ 0.69
USP4-208ENST00000464168 BLOC1S3Q6QNY0 202 aa19.37■□□□□ 0.69
USP4-208ENST00000464168 IKZF5Q9H5V7 419 aa19.37■□□□□ 0.69
USP4-208ENST00000464168 SLC52A3Q9NQ40 469 aa19.37■□□□□ 0.69
USP4-208ENST00000464168 SLC7A8Q9UHI5 535 aa19.37■□□□□ 0.69
USP4-208ENST00000464168 GRIP1Q9Y3R0 1128 aa19.37■□□□□ 0.69
USP4-208ENST00000464168 MEGF8Q7Z7M0 2845 aa19.36■□□□□ 0.69
USP4-208ENST00000464168 TRBV5-3A0A0A0MS03 114 aa19.36■□□□□ 0.69
USP4-208ENST00000464168 BIDP55957 195 aa19.36■□□□□ 0.69
USP4-208ENST00000464168 SCARB2Q14108 478 aa19.36■□□□□ 0.69
USP4-208ENST00000464168 PAGE3Q5JUK9 113 aa19.36■□□□□ 0.69
USP4-208ENST00000464168 SWT1Q5T5J6 900 aaKnown RBP19.36■□□□□ 0.69
USP4-208ENST00000464168 LINC00114Q6XXX2 140 aa19.36■□□□□ 0.69
USP4-208ENST00000464168 OR5J2Q8NH18 312 aa19.36■□□□□ 0.69
USP4-208ENST00000464168 OR51F2Q8NH61 342 aa19.36■□□□□ 0.69
USP4-208ENST00000464168 TMEM54Q969K7 222 aa19.36■□□□□ 0.69
USP4-208ENST00000464168 ZNF607Q96SK3 696 aa19.36■□□□□ 0.69
USP4-208ENST00000464168 ZNF385DQ9H6B1 395 aa19.36■□□□□ 0.69
USP4-208ENST00000464168 TMEM38AQ9H6F2 299 aa19.36■□□□□ 0.69
USP4-208ENST00000464168 ZNF346Q9UL40 294 aaKnown RBP19.36■□□□□ 0.69
USP4-208ENST00000464168 USH1CQ9Y6N9 552 aa19.36■□□□□ 0.69
USP4-208ENST00000464168 A0A1W2PPW3 197 aa19.35■□□□□ 0.69
USP4-208ENST00000464168 C11orf98E9PRG8 122 aa19.35■□□□□ 0.69
USP4-208ENST00000464168 MT-ATP6P00846 226 aa19.35■□□□□ 0.69
USP4-208ENST00000464168 ADORA3P0DMS8 318 aa19.35■□□□□ 0.69
USP4-208ENST00000464168 GPX2P18283 190 aa19.35■□□□□ 0.69
USP4-208ENST00000464168 PPIBP23284 216 aaKnown RBP19.35■□□□□ 0.69
USP4-208ENST00000464168 SLC6A2P23975 617 aa19.35■□□□□ 0.69
USP4-208ENST00000464168 AQP1P29972 269 aa19.35■□□□□ 0.69
USP4-208ENST00000464168 MAGEB1P43366 347 aa19.35■□□□□ 0.69
USP4-208ENST00000464168 STX1BP61266 288 aa19.35■□□□□ 0.69
USP4-208ENST00000464168 ALKBH6Q3KRA9 238 aa19.35■□□□□ 0.69
USP4-208ENST00000464168 LRFN4Q6PJG9 635 aa19.35■□□□□ 0.69
USP4-208ENST00000464168 C1orf229Q6ZS94 237 aaPredicted RBP19.35■□□□□ 0.69
USP4-208ENST00000464168 SLC22A24Q8N4F4 322 aa19.35■□□□□ 0.69
USP4-208ENST00000464168 PAQR4Q8N4S7 273 aaPredicted RBP19.35■□□□□ 0.69
USP4-208ENST00000464168 BHLHE22Q8NFJ8 381 aaPredicted RBP19.35■□□□□ 0.69
USP4-208ENST00000464168 OR6X1Q8NH79 312 aa19.35■□□□□ 0.69
USP4-208ENST00000464168 SPDL1Q96EA4 605 aa19.35■□□□□ 0.69
USP4-208ENST00000464168 ZNF416Q9BWM5 594 aa19.35■□□□□ 0.69
USP4-208ENST00000464168 NKIRAS1Q9NYS0 192 aa19.35■□□□□ 0.69
USP4-208ENST00000464168 GLTPQ9NZD2 209 aa19.35■□□□□ 0.69
USP4-208ENST00000464168 SLC13A4Q9UKG4 626 aa19.35■□□□□ 0.69
USP4-208ENST00000464168 SERPINB7O75635 380 aa19.34■□□□□ 0.69
USP4-208ENST00000464168 RGS9O75916 674 aaPredicted RBP19.34■□□□□ 0.69
USP4-208ENST00000464168 MFN2O95140 757 aa19.34■□□□□ 0.69
USP4-208ENST00000464168 LSP1P33241 339 aa19.34■□□□□ 0.69
USP4-208ENST00000464168 MAGOHP61326 146 aaKnown RBP19.34■□□□□ 0.69
USP4-208ENST00000464168 FAHD2BQ6P2I3 314 aaPredicted RBP19.34■□□□□ 0.69
USP4-208ENST00000464168 SHQ1Q6PI26 577 aaKnown RBP19.34■□□□□ 0.69
USP4-208ENST00000464168 SLC35D2Q76EJ3 337 aa19.34■□□□□ 0.69
USP4-208ENST00000464168 RANBP3LQ86VV4 465 aaPredicted RBP19.34■□□□□ 0.69
USP4-208ENST00000464168 ARMC8Q8IUR7 673 aa19.34■□□□□ 0.69
USP4-208ENST00000464168 FAHD2AQ96GK7 314 aa19.34■□□□□ 0.69
USP4-208ENST00000464168 SH3GL3Q99963 347 aa19.34■□□□□ 0.69
USP4-208ENST00000464168 TAAR3PQ9P1P4 343 aa19.34■□□□□ 0.69
USP4-208ENST00000464168 TRAV20A0A0B4J274 112 aa19.33■□□□□ 0.68
USP4-208ENST00000464168 CLPTM1O96005 669 aa19.33■□□□□ 0.68
USP4-208ENST00000464168 OR8G3PP0DMU2 310 aa19.33■□□□□ 0.68
USP4-208ENST00000464168 COMPP49747 757 aaPredicted RBP19.33■□□□□ 0.68
USP4-208ENST00000464168 MYBPC1Q00872 1141 aa19.33■□□□□ 0.68
USP4-208ENST00000464168 SCGB2A2Q13296 93 aa19.33■□□□□ 0.68
USP4-208ENST00000464168 NKPD1Q17RQ9 610 aa19.33■□□□□ 0.68
USP4-208ENST00000464168 RGS7BPQ6MZT1 257 aaPredicted RBP19.33■□□□□ 0.68
USP4-208ENST00000464168 THSD4Q6ZMP0 1018 aa19.33■□□□□ 0.68
USP4-208ENST00000464168 SLC30A7Q8NEW0 376 aa19.33■□□□□ 0.68
USP4-208ENST00000464168 ZNF418Q8TF45 676 aaPredicted RBP19.33■□□□□ 0.68
USP4-208ENST00000464168 TSPAN32Q96QS1 320 aa19.33■□□□□ 0.68
USP4-208ENST00000464168 MCHR1Q99705 422 aa19.33■□□□□ 0.68
USP4-208ENST00000464168 EVA1AQ9H8M9 152 aa19.33■□□□□ 0.68
USP4-208ENST00000464168 TCF7L2Q9NQB0 619 aa19.33■□□□□ 0.68
USP4-208ENST00000464168 HINT3Q9NQE9 182 aaKnown RBP19.33■□□□□ 0.68
USP4-208ENST00000464168 TMEM38BQ9NVV0 291 aa19.33■□□□□ 0.68
USP4-208ENST00000464168 TAS2R5Q9NYW4 299 aa19.33■□□□□ 0.68
USP4-208ENST00000464168 CCDC167Q9P0B6 97 aa19.33■□□□□ 0.68
USP4-208ENST00000464168 C17orf100A8MU93 164 aa19.32■□□□□ 0.68
USP4-208ENST00000464168 M0R3H8 397 aa19.32■□□□□ 0.68
USP4-208ENST00000464168 FMO6PO60774 539 aa19.32■□□□□ 0.68
USP4-208ENST00000464168 OR6A2O95222 327 aa19.32■□□□□ 0.68
USP4-208ENST00000464168 AVPP01185 164 aa19.32■□□□□ 0.68
USP4-208ENST00000464168 FAM157BP0CG42 384 aa19.32■□□□□ 0.68
USP4-208ENST00000464168 CCL2P13500 99 aa19.32■□□□□ 0.68
USP4-208ENST00000464168 ZNF250P15622 560 aa19.32■□□□□ 0.68
USP4-208ENST00000464168 CCL8P80075 99 aa19.32■□□□□ 0.68
USP4-208ENST00000464168 ZP4Q12836 540 aa19.32■□□□□ 0.68
USP4-208ENST00000464168 ZNF613Q6PF04 617 aa19.32■□□□□ 0.68
USP4-208ENST00000464168 SMYD1Q8NB12 490 aa19.32■□□□□ 0.68
USP4-208ENST00000464168 HIPK4Q8NE63 616 aa19.32■□□□□ 0.68
USP4-208ENST00000464168 G6PC2Q9NQR9 355 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms