RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 IL11P20809 199 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 TCEA1P23193 301 aaKnown RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 PPIBP23284 216 aaKnown RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 DNASE1L1P49184 302 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 CYB561P49447 251 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 HLCSP50747 726 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 MNAT1P51948 309 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ACTR3P61158 418 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 DCAF7P61962 342 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 PPP2R2BQ00005 443 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 OC90Q02509 493 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF117Q03924 483 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 SNTB1Q13884 538 aaKnown RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 VEZF1Q14119 521 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 FLOT2Q14254 428 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF141Q15928 474 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF585BQ52M93 769 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 MRPL2Q5T653 305 aaKnown RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 C6orf163Q5TEZ5 329 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 C1orf146Q5VVC0 180 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 REEP3Q6NUK4 255 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 WDR88Q6ZMY6 472 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 LRRC74BQ6ZQY2 392 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 C16orf62Q7Z3J2 963 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 TMEM179BQ7Z7N9 219 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 MEX3DQ86XN8 651 aaKnown RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 HS3ST5Q8IZT8 346 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF619Q8N2I2 560 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 SLC5A8Q8N695 610 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF614Q8N883 585 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 OR52L2PQ8NGH6 319 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 OR6T1Q8NGN1 323 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 OR8K3Q8NH51 312 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 OR52P1PQ8NH57 321 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 SPPL2AQ8TCT8 520 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 TMEM158Q8WZ71 300 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 FAM162AQ96A26 154 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 MCUR1Q96AQ8 359 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 SPACA9Q96E40 222 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 DNAJA3Q96EY1 480 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 SH3YL1Q96HL8 342 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 C7orf34Q96L11 122 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 NSMCE2Q96MF7 247 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 TRNT1Q96Q11 434 aaKnown RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 SEPHS2Q99611 448 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ZDHHC11Q9H8X9 412 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 Q9N2J8 555 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 DCAF13Q9NV06 445 aaKnown RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 MRGBPQ9NV56 204 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 RHCGQ9UBD6 479 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 COPS7AQ9UBW8 275 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 PRODH2Q9UF12 536 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 FBXL2Q9UKC9 423 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 OR10H1Q9Y4A9 318 aa3.21□□□□□ -1.9
SCFD1-204ENST00000463622 MAGED1Q9Y5V3 778 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-204ENST00000463622 ANK3Q12955 4377 aaKnown RBP3.2□□□□□ -1.9
SCFD1-204ENST00000463622 A0A1W2PPR1 153 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 H0Y3Z8 333 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 BCKDKO14874 412 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 HS6ST1O60243 411 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 TIPRLO75663 272 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF682O95780 498 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 IGHG3P01860 377 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 UBTFL6P0CB48 400 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-204ENST00000463622 EVI2BP34910 448 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 CASP3P42574 277 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 ACAA2P42765 397 aaKnown RBP3.2□□□□□ -1.9
SCFD1-204ENST00000463622 CRISP3P54108 245 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 ATP12AP54707 1039 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 P2RX3P56373 397 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 RBBP4Q09028 425 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 BNIP2Q12982 314 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 SKP2Q13309 424 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 BIKQ13323 160 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 PMS2P11Q13670 270 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 FGFBP1Q14512 234 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 NTRK2Q16620 822 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 NRF1Q16656 503 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 KLHL26Q53HC5 615 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF311Q5JNZ3 666 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 RIPPLY2Q5TAB7 128 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 AP1ARQ63HQ0 302 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 ERICH5Q6P6B1 374 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 ZCCHC12Q6PEW1 402 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 DHRS4L2Q6PKH6 230 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 B3GNT6Q6ZMB0 384 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 EIF3MQ7L2H7 374 aaKnown RBP3.2□□□□□ -1.9
SCFD1-204ENST00000463622 SPATA24Q86W54 205 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 CARM1Q86X55 608 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 DHFR2Q86XF0 187 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 EPHX4Q8IUS5 362 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 WDSUB1Q8N9V3 476 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 FAM71CQ8NEG0 241 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 C17orf47Q8NEP4 570 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 OR5M1Q8NGP8 315 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 B4GALNT2Q8NHY0 566 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 BBS10Q8TAM1 723 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 RNASE6Q93091 150 aaKnown RBP3.2□□□□□ -1.9
SCFD1-204ENST00000463622 TPD52L3Q96J77 140 aa3.2□□□□□ -1.9
SCFD1-204ENST00000463622 ART5Q96L15 291 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms