RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 OR6S1Q8NH40 331 aa13.13□□□□□ -0.31
CMSS1-202ENST00000463526 MRPL39Q9NYK5 338 aaKnown RBP13.13□□□□□ -0.31
CMSS1-202ENST00000463526 NKIRAS1Q9NYS0 192 aa13.13□□□□□ -0.31
CMSS1-202ENST00000463526 TAAR3PQ9P1P4 343 aa13.13□□□□□ -0.31
CMSS1-202ENST00000463526 TESQ9UGI8 421 aaKnown RBP13.13□□□□□ -0.31
CMSS1-202ENST00000463526 USH1CQ9Y6N9 552 aa13.13□□□□□ -0.31
CMSS1-202ENST00000463526 OR6A2O95222 327 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 CLPTM1O96005 669 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 TFP02787 698 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 CCL2P13500 99 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 MVKQ03426 396 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 PAGE3Q5JUK9 113 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 AVPI1Q5T686 147 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 REP15Q6BDI9 236 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 RGS7BPQ6MZT1 257 aaPredicted RBP13.12□□□□□ -0.31
CMSS1-202ENST00000463526 ZNF627Q7L945 461 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 PXKQ7Z7A4 578 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 CROCCP2Q86T23 111 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 SMYD1Q8NB12 490 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 SEMA6DQ8NFY4 1073 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 OR51F2Q8NH61 342 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 ZNF418Q8TF45 676 aaPredicted RBP13.12□□□□□ -0.31
CMSS1-202ENST00000463526 ZNF607Q96SK3 696 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 SH3GL3Q99963 347 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 RACGAP1Q9H0H5 632 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 RNF121Q9H920 327 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 VAPAQ9P0L0 249 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.12□□□□□ -0.31
CMSS1-202ENST00000463526 SLC7A8Q9UHI5 535 aa13.12□□□□□ -0.31
CMSS1-202ENST00000463526 ZNF346Q9UL40 294 aaKnown RBP13.12□□□□□ -0.31
CMSS1-202ENST00000463526 A0A0A6YYJ9 748 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 PRORSD1PA6NEY8 169 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 M0R3H8 397 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 SERPINA5P05154 406 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 SLC6A2P23975 617 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 MAGOHP61326 146 aaKnown RBP13.11□□□□□ -0.31
CMSS1-202ENST00000463526 LMO4P61968 165 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 CCL8P80075 99 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 MELKQ14680 651 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 LRIF1Q5T3J3 769 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 EPGNQ6UW88 154 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 WDR88Q6ZMY6 472 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 DEF8Q6ZN54 512 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 SLC35D2Q76EJ3 337 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 RANBP3LQ86VV4 465 aaPredicted RBP13.11□□□□□ -0.31
CMSS1-202ENST00000463526 ARMC8Q8IUR7 673 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 ZNF584Q8IVC4 421 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 FUNDC1Q8IVP5 155 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 PAQR4Q8N4S7 273 aaPredicted RBP13.11□□□□□ -0.31
CMSS1-202ENST00000463526 ICA1LQ8NDH6 482 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 OR5J2Q8NH18 312 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 SPDL1Q96EA4 605 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 TSPAN32Q96QS1 320 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 MCHR1Q99705 422 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 IKZF5Q9H5V7 419 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 DENND2DQ9H6A0 471 aaPredicted RBP13.11□□□□□ -0.31
CMSS1-202ENST00000463526 GLTPQ9NZD2 209 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 CCDC167Q9P0B6 97 aa13.11□□□□□ -0.31
CMSS1-202ENST00000463526 LOC105371242A0A075B767 164 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 RNF13O43567 381 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 SPRY1O43609 319 aaPredicted RBP13.1□□□□□ -0.31
CMSS1-202ENST00000463526 SERPINB7O75635 380 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 RP2O75695 350 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 CH25HO95992 272 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 LCKP06239 509 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 SELENOVP59797 346 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 ERVS71-1P61550 626 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 MYBPC1Q00872 1141 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 TMEM154Q6P9G4 183 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 BLOC1S3Q6QNY0 202 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 ZNF771Q7L3S4 317 aaPredicted RBP13.1□□□□□ -0.31
CMSS1-202ENST00000463526 PIWIL3Q7Z3Z3 882 aaKnown RBP13.1□□□□□ -0.31
CMSS1-202ENST00000463526 SLC22A24Q8N4F4 322 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 SLC30A7Q8NEW0 376 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 GCDHQ92947 438 aaPredicted RBP13.1□□□□□ -0.31
CMSS1-202ENST00000463526 TMEM54Q969K7 222 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 TMEM43Q9BTV4 400 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 ZNF416Q9BWM5 594 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 CDH20Q9HBT6 801 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 HINT3Q9NQE9 182 aaKnown RBP13.1□□□□□ -0.31
CMSS1-202ENST00000463526 FBXL3Q9UKT7 428 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 PCDHB10Q9UN67 800 aa13.1□□□□□ -0.31
CMSS1-202ENST00000463526 TRAV20A0A0B4J274 112 aa13.09□□□□□ -0.31
CMSS1-202ENST00000463526 CPSF4LA6NMK7 179 aaKnown RBP13.09□□□□□ -0.31
CMSS1-202ENST00000463526 EVPLLA8MZ36 301 aa13.09□□□□□ -0.31
CMSS1-202ENST00000463526 KPNA4O00629 521 aaPredicted RBP13.09□□□□□ -0.31
CMSS1-202ENST00000463526 POLR3GO15318 223 aaPredicted RBP13.09□□□□□ -0.31
CMSS1-202ENST00000463526 TPD52L2O43399 206 aaKnown RBP13.09□□□□□ -0.31
CMSS1-202ENST00000463526 MT-ATP6P00846 226 aa13.09□□□□□ -0.31
CMSS1-202ENST00000463526 AVPP01185 164 aa13.09□□□□□ -0.31
CMSS1-202ENST00000463526 OPN1SWP03999 348 aa13.09□□□□□ -0.31
CMSS1-202ENST00000463526 OR8G3PP0DMU2 310 aa13.09□□□□□ -0.31
CMSS1-202ENST00000463526 PPIBP23284 216 aaKnown RBP13.09□□□□□ -0.31
CMSS1-202ENST00000463526 GLO1Q04760 184 aa13.09□□□□□ -0.31
CMSS1-202ENST00000463526 RBBP4Q09028 425 aa13.09□□□□□ -0.31
CMSS1-202ENST00000463526 SCGB2A2Q13296 93 aa13.09□□□□□ -0.31
CMSS1-202ENST00000463526 TMEM53Q6P2H8 277 aa13.09□□□□□ -0.31
CMSS1-202ENST00000463526 LRFN4Q6PJG9 635 aa13.09□□□□□ -0.31
CMSS1-202ENST00000463526 C1orf229Q6ZS94 237 aaPredicted RBP13.09□□□□□ -0.31
CMSS1-202ENST00000463526 PEG10Q86TG7 708 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms