RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 VNN3Q9NY84 501 aa17.42■□□□□ 0.38
COL9A3-204ENST00000463487 GLTPQ9NZD2 209 aa17.42■□□□□ 0.38
COL9A3-204ENST00000463487 POFUT2Q9Y2G5 429 aa17.42■□□□□ 0.38
COL9A3-204ENST00000463487 AMDHD2Q9Y303 409 aa17.42■□□□□ 0.38
COL9A3-204ENST00000463487 MAGED1Q9Y5V3 778 aaPredicted RBP17.42■□□□□ 0.38
COL9A3-204ENST00000463487 ANKHD1Q8IWZ3 2542 aaKnown RBP17.42■□□□□ 0.38
COL9A3-204ENST00000463487 ZNF99A8MXY4 864 aaPredicted RBP17.41■□□□□ 0.38
COL9A3-204ENST00000463487 PTP4A3O75365 173 aa17.41■□□□□ 0.38
COL9A3-204ENST00000463487 PGA4P0DJD7 388 aa17.41■□□□□ 0.38
COL9A3-204ENST00000463487 PGA3P0DJD8 388 aa17.41■□□□□ 0.38
COL9A3-204ENST00000463487 LGALS3BPQ08380 585 aa17.41■□□□□ 0.38
COL9A3-204ENST00000463487 PPP1R8Q12972 351 aaKnown RBP17.41■□□□□ 0.38
COL9A3-204ENST00000463487 KPNB1Q14974 876 aaKnown RBP17.41■□□□□ 0.38
COL9A3-204ENST00000463487 DAZAP2Q15038 168 aaPredicted RBP17.41■□□□□ 0.38
COL9A3-204ENST00000463487 PPA1Q15181 289 aa17.41■□□□□ 0.38
COL9A3-204ENST00000463487 GABRA6Q16445 453 aa17.41■□□□□ 0.38
COL9A3-204ENST00000463487 CEACAM16Q2WEN9 425 aa17.41■□□□□ 0.38
COL9A3-204ENST00000463487 ARMC4Q5T2S8 1044 aa17.41■□□□□ 0.38
COL9A3-204ENST00000463487 ANKRD16Q6P6B7 361 aa17.41■□□□□ 0.38
COL9A3-204ENST00000463487 ARIH2OSQ8N7S6 290 aa17.41■□□□□ 0.38
COL9A3-204ENST00000463487 LRRC75AQ8NAA5 344 aa17.41■□□□□ 0.38
COL9A3-204ENST00000463487 TMEM54Q969K7 222 aa17.41■□□□□ 0.38
COL9A3-204ENST00000463487 ZNF570Q96NI8 536 aa17.41■□□□□ 0.38
COL9A3-204ENST00000463487 GPX7Q96SL4 187 aaPredicted RBP17.41■□□□□ 0.38
COL9A3-204ENST00000463487 DGCR6LQ9BY27 220 aa17.41■□□□□ 0.38
COL9A3-204ENST00000463487 MOV10Q9HCE1 1003 aaKnown RBP17.41■□□□□ 0.38
COL9A3-204ENST00000463487 OBP2BQ9NPH6 170 aa17.41■□□□□ 0.38
COL9A3-204ENST00000463487 PDP1Q9P0J1 537 aaPredicted RBP17.41■□□□□ 0.38
COL9A3-204ENST00000463487 PKDREJQ9NTG1 2253 aa17.41■□□□□ 0.38
COL9A3-204ENST00000463487 A6NNC1 897 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 TRMUO75648 421 aaKnown RBP17.4■□□□□ 0.38
COL9A3-204ENST00000463487 WNT11O96014 354 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 GASTP01350 101 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 APEHP13798 732 aaKnown RBP17.4■□□□□ 0.38
COL9A3-204ENST00000463487 HOXB1P14653 301 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-204ENST00000463487 CRYGSP22914 178 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 SDHAP31040 664 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 ACVR1BP36896 505 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 ZNF84P51523 738 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 NR1H2P55055 460 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 UBE2NP61088 152 aaKnown RBP17.4■□□□□ 0.38
COL9A3-204ENST00000463487 CD47Q08722 323 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 COX10Q12887 443 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 FHL1Q13642 323 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 ATP6AP1Q15904 470 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 RFX4Q33E94 735 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 ZNF770Q6IQ21 691 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-204ENST00000463487 ZNF620Q6ZNG0 422 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 WFDC8Q8IUA0 241 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 OR1K1Q8NGR3 316 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 GTPBP3Q969Y2 492 aaKnown RBP17.4■□□□□ 0.38
COL9A3-204ENST00000463487 NRBF2Q96F24 287 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 BOD1Q96IK1 185 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 RBP7Q96R05 134 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 ALG12Q9BV10 488 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 OR52D1Q9H346 318 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 KIF17Q9P2E2 1029 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 ZNF346Q9UL40 294 aaKnown RBP17.4■□□□□ 0.38
COL9A3-204ENST00000463487 CDH10Q9Y6N8 788 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 ADGRG4Q8IZF6 3080 aa17.4■□□□□ 0.38
COL9A3-204ENST00000463487 AHCYL1O43865 530 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 ANXA8P13928 327 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 NOS3P29474 1203 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 ERVK-25P63136 954 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 TLE4Q04727 773 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 TAB1Q15750 504 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 BEX5Q5H9J7 111 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 ALKBH2Q6NS38 261 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 SHQ1Q6PI26 577 aaKnown RBP17.39■□□□□ 0.37
COL9A3-204ENST00000463487 RASSF6Q6ZTQ3 369 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 ADCK1Q86TW2 530 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 TMEM200AQ86VY9 491 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 CCDC36Q8IYA8 594 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 CLDN22Q8N7P3 220 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 SYT14Q8NB59 555 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 MAGEE2Q8TD90 523 aaPredicted RBP17.39■□□□□ 0.37
COL9A3-204ENST00000463487 DNAJC9Q8WXX5 260 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 TSPAN32Q96QS1 320 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 GPA33Q99795 319 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 IFT27Q9BW83 186 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 SMURF2Q9HAU4 748 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 NRIP3Q9NQ35 241 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 HECTD1Q9ULT8 2610 aa17.39■□□□□ 0.37
COL9A3-204ENST00000463487 IDH3BO43837 385 aa17.38■□□□□ 0.37
COL9A3-204ENST00000463487 QDPRP09417 244 aa17.38■□□□□ 0.37
COL9A3-204ENST00000463487 GUCA1AP43080 201 aaPredicted RBP17.38■□□□□ 0.37
COL9A3-204ENST00000463487 IST1P53990 364 aa17.38■□□□□ 0.37
COL9A3-204ENST00000463487 ARF1P84077 181 aaKnown RBP17.38■□□□□ 0.37
COL9A3-204ENST00000463487 THEM4Q5T1C6 240 aa17.38■□□□□ 0.37
COL9A3-204ENST00000463487 KLHL17Q6TDP4 642 aa17.38■□□□□ 0.37
COL9A3-204ENST00000463487 LINGO2Q7L985 606 aa17.38■□□□□ 0.37
COL9A3-204ENST00000463487 HIPK1Q86Z02 1210 aa17.38■□□□□ 0.37
COL9A3-204ENST00000463487 ATG16L2Q8NAA4 619 aa17.38■□□□□ 0.37
COL9A3-204ENST00000463487 OR52N5Q8NH56 324 aa17.38■□□□□ 0.37
COL9A3-204ENST00000463487 OR5K1Q8NHB7 308 aa17.38■□□□□ 0.37
COL9A3-204ENST00000463487 ZNF519Q8TB69 540 aa17.38■□□□□ 0.37
COL9A3-204ENST00000463487 NANOS1Q8WY41 292 aaKnown RBP17.38■□□□□ 0.37
COL9A3-204ENST00000463487 STMN2Q93045 179 aa17.38■□□□□ 0.37
COL9A3-204ENST00000463487 KCNK17Q96T54 332 aa17.38■□□□□ 0.37
COL9A3-204ENST00000463487 FEVQ99581 238 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms