RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 J3KTA2 159 aa14.12□□□□□ -0.15
COL1A1-202ENST00000463440 PIP5K1CO60331 668 aa14.12□□□□□ -0.15
COL1A1-202ENST00000463440 IGHG1P01857 330 aa14.12□□□□□ -0.15
COL1A1-202ENST00000463440 CD79AP11912 226 aa14.12□□□□□ -0.15
COL1A1-202ENST00000463440 IFI30P13284 250 aa14.12□□□□□ -0.15
COL1A1-202ENST00000463440 B4GALT1P15291 398 aa14.12□□□□□ -0.15
COL1A1-202ENST00000463440 AQP2P41181 271 aa14.12□□□□□ -0.15
COL1A1-202ENST00000463440 DAP3P51398 398 aaKnown RBP14.12□□□□□ -0.15
COL1A1-202ENST00000463440 IDH3GP51553 393 aaPredicted RBP14.12□□□□□ -0.15
COL1A1-202ENST00000463440 CLRN1P58418 232 aa14.12□□□□□ -0.15
COL1A1-202ENST00000463440 NPRL3Q12980 569 aa14.12□□□□□ -0.15
COL1A1-202ENST00000463440 CLEC12BQ2HXU8 276 aa14.12□□□□□ -0.15
COL1A1-202ENST00000463440 C11orf71Q6IPW1 123 aa14.12□□□□□ -0.15
COL1A1-202ENST00000463440 PIWIL3Q7Z3Z3 882 aaKnown RBP14.12□□□□□ -0.15
COL1A1-202ENST00000463440 MDP1Q86V88 176 aa14.12□□□□□ -0.15
COL1A1-202ENST00000463440 IL17RDQ8NFM7 739 aa14.12□□□□□ -0.15
COL1A1-202ENST00000463440 OR4F15Q8NGB8 312 aa14.12□□□□□ -0.15
COL1A1-202ENST00000463440 GSX1Q9H4S2 264 aaPredicted RBP14.12□□□□□ -0.15
COL1A1-202ENST00000463440 STX18Q9P2W9 335 aaKnown RBP14.12□□□□□ -0.15
COL1A1-202ENST00000463440 ZNF503-AS2A6NEH8 195 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 CENPBD1B2RD01 187 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 FFAR1O14842 300 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 SMAD7O15105 426 aaKnown RBP14.11□□□□□ -0.15
COL1A1-202ENST00000463440 IGHV4-39P01824 125 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 HLA-HP01893 362 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 TSPAN19P0C672 248 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 PGA4P0DJD7 388 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 PGA3P0DJD8 388 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 SAGP10523 405 aaPredicted RBP14.11□□□□□ -0.15
COL1A1-202ENST00000463440 GSG1Q2KHT4 349 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 CDK20Q8IZL9 346 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 RNF113BQ8IZP6 322 aaKnown RBP14.11□□□□□ -0.15
COL1A1-202ENST00000463440 PGAM4Q8N0Y7 254 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 CIARTQ8N365 385 aaPredicted RBP14.11□□□□□ -0.15
COL1A1-202ENST00000463440 RNF148Q8N7C7 305 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 MOSPD2Q8NHP6 518 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 ACOT11Q8WXI4 607 aaPredicted RBP14.11□□□□□ -0.15
COL1A1-202ENST00000463440 DENND2DQ9H6A0 471 aaPredicted RBP14.11□□□□□ -0.15
COL1A1-202ENST00000463440 MAN2C1Q9NTJ4 1040 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 DCAF13Q9NV06 445 aaKnown RBP14.11□□□□□ -0.15
COL1A1-202ENST00000463440 ARL8BQ9NVJ2 186 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 NDE1Q9NXR1 346 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 B3GNT2Q9NY97 397 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 SAMD4AQ9UPU9 718 aaKnown RBP14.11□□□□□ -0.15
COL1A1-202ENST00000463440 HIF3AQ9Y2N7 669 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 FAM32AQ9Y421 112 aaKnown RBP14.11□□□□□ -0.15
COL1A1-202ENST00000463440 ENPP4Q9Y6X5 453 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 PMF1-BGLAPU3KQ54 211 aa14.11□□□□□ -0.15
COL1A1-202ENST00000463440 ZNF469Q96JG9 3925 aaPredicted RBP14.1□□□□□ -0.15
COL1A1-202ENST00000463440 NPIPB13A6NJU9 1138 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 VSTM5A8MXK1 200 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 NPIPB4C9JG80 1138 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 DHHO43323 396 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 NDUFS7O75251 213 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 UBL3O95164 117 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 RAB36O95755 333 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 CELA3BP08861 270 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 QDPRP09417 244 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 CALCRP30988 508 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 ACVR1BP36896 505 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 MXRA7P84157 204 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 PRKCDQ05655 676 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 LAPTM4AQ15012 233 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 RAB35Q15286 201 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 TAF11Q15544 211 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 ALG10Q5BKT4 473 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 SAMD4BQ5PRF9 694 aaKnown RBP14.1□□□□□ -0.15
COL1A1-202ENST00000463440 LRFN4Q6PJG9 635 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 CLEC9AQ6UXN8 241 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 ZNF730Q6ZMV8 503 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 RRM2BQ7LG56 351 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 NRMQ8IXM6 262 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 ANKS4BQ8N8V4 417 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 NOXO1Q8NFA2 376 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 ASB10Q8WXI3 467 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 CCT8L2Q96SF2 557 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 SMR3AQ99954 134 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 ANKRD19PQ9H560 264 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 SEC61A2Q9H9S3 476 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 CA10Q9NS85 328 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 GDF2Q9UK05 429 aaPredicted RBP14.1□□□□□ -0.15
COL1A1-202ENST00000463440 FBXL3Q9UKT7 428 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 C2CD3Q4AC94 2353 aa14.1□□□□□ -0.15
COL1A1-202ENST00000463440 IGHV2OR16-5A0A0B4J2B6 119 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 H7C417 338 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 PDE5AO76074 875 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 PRSS23O95084 383 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 FARS2O95363 451 aaKnown RBP14.09□□□□□ -0.15
COL1A1-202ENST00000463440 OR8G3PP0DMU2 310 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 NR2C1P13056 603 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 HSD17B1P14061 328 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 ACADSP16219 412 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 TCN1P20061 433 aaPredicted RBP14.09□□□□□ -0.15
COL1A1-202ENST00000463440 MAKP20794 623 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 SERPINF1P36955 418 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 PTDSS1P48651 473 aaKnown RBP14.09□□□□□ -0.15
COL1A1-202ENST00000463440 ZNF84P51523 738 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 MNAT1P51948 309 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 NUDT6P53370 316 aa14.09□□□□□ -0.15
COL1A1-202ENST00000463440 LSM11P83369 360 aaKnown RBP eCLIP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms