RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 THAP1Q9NVV9 213 aa9.54□□□□□ -0.88
PTPN7-204ENST00000462815 MRPL39Q9NYK5 338 aaKnown RBP9.54□□□□□ -0.88
PTPN7-204ENST00000462815 SLAMF8Q9P0V8 285 aa9.54□□□□□ -0.88
PTPN7-204ENST00000462815 CORINQ9Y5Q5 1042 aa9.54□□□□□ -0.88
PTPN7-204ENST00000462815 TGP01266 2768 aa9.54□□□□□ -0.88
PTPN7-204ENST00000462815 CLIC1O00299 241 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 POLR3GO15318 223 aaPredicted RBP9.53□□□□□ -0.88
PTPN7-204ENST00000462815 RGS9O75916 674 aaPredicted RBP9.53□□□□□ -0.88
PTPN7-204ENST00000462815 LYPD3O95274 346 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 ANP32DO95626 131 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 CLPTM1O96005 669 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 PNPP00491 289 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 FSHBP01225 129 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 THY1P04216 161 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 PATE4P0C8F1 98 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 KITP10721 976 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 RAB1AP62820 205 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 GUCY1A3Q02108 690 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 PUDPQ08623 228 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 CAMK2DQ13557 499 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 RAB39AQ14964 217 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 TRMT5Q32P41 509 aaKnown RBP9.53□□□□□ -0.88
PTPN7-204ENST00000462815 PXKQ7Z7A4 578 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 FUNDC1Q8IVP5 155 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 OR51F2Q8NH61 342 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 NFKBIDQ8NI38 313 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 TMEM43Q9BTV4 400 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 ULBP2Q9BZM5 246 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 RMND5AQ9H871 391 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 TESQ9UGI8 421 aaKnown RBP9.53□□□□□ -0.88
PTPN7-204ENST00000462815 SLC7A8Q9UHI5 535 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 NOX1Q9Y5S8 564 aa9.53□□□□□ -0.88
PTPN7-204ENST00000462815 PRKDCP78527 4128 aaKnown RBP9.53□□□□□ -0.88
PTPN7-204ENST00000462815 LOC105371242A0A075B767 164 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 TRAV20A0A0B4J274 112 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 UBL3O95164 117 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 SERPINA5P05154 406 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 ZNF250P15622 560 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 EPHA1P21709 976 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 CDH12P55289 794 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 ERVS71-1P61550 626 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 RPS23P62266 143 aaKnown RBP9.52□□□□□ -0.89
PTPN7-204ENST00000462815 OR1Q1Q15612 314 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 NPTX1Q15818 432 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 C6orf10Q5SRN2 563 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 LRFN4Q6PJG9 635 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 C1QL2Q7Z5L3 287 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 PEG10Q86TG7 708 aaKnown RBP9.52□□□□□ -0.89
PTPN7-204ENST00000462815 TSPYL5Q86VY4 417 aaPredicted RBP9.52□□□□□ -0.89
PTPN7-204ENST00000462815 GTF3AQ92664 365 aaKnown RBP9.52□□□□□ -0.89
PTPN7-204ENST00000462815 SLC47A1Q96FL8 570 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 MAGEB18Q96M61 343 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 CCDC134Q9H6E4 229 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 ZNF665Q9H7R5 613 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 TCF7L2Q9NQB0 619 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 VAPAQ9P0L0 249 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 RPS6KB2Q9UBS0 482 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 PCDHB10Q9UN67 800 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 POFUT2Q9Y2G5 429 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 GRIP1Q9Y3R0 1128 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 VWFP04275 2813 aa9.52□□□□□ -0.89
PTPN7-204ENST00000462815 TMEM247A6NEH6 219 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 C17orf100A8MU93 164 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 PPIHO43447 177 aaKnown RBP9.51□□□□□ -0.89
PTPN7-204ENST00000462815 RAB36O95755 333 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 NQO1P15559 274 aaKnown RBP9.51□□□□□ -0.89
PTPN7-204ENST00000462815 ACTG1P63261 375 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 CDK6Q00534 326 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 MYBPC1Q00872 1141 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 PMS2P3Q13401 168 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 HIST3H3Q16695 136 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 ALKBH6Q3KRA9 238 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 PAGE3Q5JUK9 113 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 SWT1Q5T5J6 900 aaKnown RBP9.51□□□□□ -0.89
PTPN7-204ENST00000462815 REP15Q6BDI9 236 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 NXNQ6DKJ4 435 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 REEP3Q6NUK4 255 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 THSD4Q6ZMP0 1018 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 PIWIL3Q7Z3Z3 882 aaKnown RBP9.51□□□□□ -0.89
PTPN7-204ENST00000462815 SLC22A24Q8N4F4 322 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 C3orf56Q8N813 242 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 ZDHHC22Q8N966 263 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 OR6X1Q8NH79 312 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 ZNF418Q8TF45 676 aaPredicted RBP9.51□□□□□ -0.89
PTPN7-204ENST00000462815 ZMYND19Q96E35 227 aaPredicted RBP9.51□□□□□ -0.89
PTPN7-204ENST00000462815 SEPHS2Q99611 448 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 ARHGDIGQ99819 225 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 ZNF426Q9BUY5 554 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 ZNF416Q9BWM5 594 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 ASPNQ9BXN1 380 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 TMEM38AQ9H6F2 299 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 B3GAT2Q9NPZ5 323 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 TMEM38BQ9NVV0 291 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 NKIRAS2Q9NYR9 191 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 TAS2R5Q9NYW4 299 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 OPN4Q9UHM6 478 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 FBXL3Q9UKT7 428 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 CACNG2Q9Y698 323 aa9.51□□□□□ -0.89
PTPN7-204ENST00000462815 UBDO15205 165 aa9.5□□□□□ -0.89
PTPN7-204ENST00000462815 PLPP2O43688 288 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms